Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CXCL12P48061 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CXCL12P48061 AC017002.4-201ENST00000604721 1525 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 EXOC5P1-201ENST00000510543 1969 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CXCL12P48061 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CXCL12P48061 RNA5SP235-201ENST00000365411 114 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.29□□□□□ -1.88
CXCL12P48061 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
CXCL12P48061 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CXCL12P48061 RNU6-225P-201ENST00000384613 103 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.29□□□□□ -1.88
CXCL12P48061 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.29□□□□□ -1.88
CXCL12P48061 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.29□□□□□ -1.88
CXCL12P48061 RSL24D1P8-201ENST00000434442 492 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 AL356535.1-201ENST00000440335 398 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 MTCYBP12-201ENST00000440559 1134 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 AC005002.1-201ENST00000447458 540 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.29□□□□□ -1.88
CXCL12P48061 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.29□□□□□ -1.88
CXCL12P48061 KC877373.1-201ENST00000479066 408 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 MTCO1P31-201ENST00000506355 492 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.29□□□□□ -1.88
CXCL12P48061 USP9YP5-201ENST00000511770 630 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 RNU6-347P-201ENST00000516658 105 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 SNORA70.19-201ENST00000516717 90 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 HMGB1P46-201ENST00000520062 610 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.29□□□□□ -1.88
CXCL12P48061 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.29□□□□□ -1.88
CXCL12P48061 H3F3AP1-201ENST00000559984 334 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.29□□□□□ -1.88
CXCL12P48061 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.29□□□□□ -1.88
CXCL12P48061 AL713922.2-201ENST00000619384 716 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.29□□□□□ -1.88
CXCL12P48061 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CXCL12P48061 AC068647.1-201ENST00000489539 2265 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CXCL12P48061 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.29□□□□□ -1.88
CXCL12P48061 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CXCL12P48061 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CXCL12P48061 RIOK3P1-201ENST00000418778 1528 ntBASIC3.29□□□□□ -1.88
CXCL12P48061 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.28□□□□□ -1.88
CXCL12P48061 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
CXCL12P48061 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CXCL12P48061 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CXCL12P48061 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CXCL12P48061 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CXCL12P48061 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.28□□□□□ -1.88
CXCL12P48061 CCNB2P1-201ENST00000399411 1150 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 AL138878.1-201ENST00000405131 347 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 RANP4-201ENST00000413361 655 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CXCL12P48061 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.28□□□□□ -1.88
CXCL12P48061 BX890604.2-201ENST00000427883 474 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 AL353705.1-201ENST00000433468 480 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 MTND2P21-201ENST00000436242 1042 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 ELOCP10-201ENST00000440624 327 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 ATP5C1P1-201ENST00000441945 895 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.28□□□□□ -1.88
CXCL12P48061 YWHAQP9-201ENST00000445891 512 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 TPRKBP1-201ENST00000456243 481 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 AC005229.2-201ENST00000456995 399 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 RPL23AP67-201ENST00000465341 474 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 SUMO1P1-201ENST00000497904 306 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 SNORD116-26-201ENST00000516006 96 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 SNORA70.14-201ENST00000516205 110 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 AC006518.1-201ENST00000541449 943 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 AC005476.1-201ENST00000554427 397 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.28□□□□□ -1.88
CXCL12P48061 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.28□□□□□ -1.88
CXCL12P48061 ELOCP34-201ENST00000604436 327 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 CR589904.2-201ENST00000612533 440 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 AL162233.1-201ENST00000620014 944 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 AL118508.4-201ENST00000624142 1176 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 AC233263.6-201ENST00000631132 1963 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.28□□□□□ -1.88
CXCL12P48061 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CXCL12P48061 AC027287.1-201ENST00000553115 1453 ntBASIC3.28□□□□□ -1.88
CXCL12P48061 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CXCL12P48061 AL359715.4-201ENST00000606629 1436 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.27□□□□□ -1.89
CXCL12P48061 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL12P48061 RNU6-666P-201ENST00000363499 107 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 SNORD74.4-201ENST00000364129 80 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 RNA5SP126-201ENST00000365092 109 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL12P48061 AC048351.1-201ENST00000420064 602 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 AC074367.1-201ENST00000438685 1125 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 AC092013.1-201ENST00000438795 332 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.27□□□□□ -1.89
CXCL12P48061 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.27□□□□□ -1.89
CXCL12P48061 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.27□□□□□ -1.89
CXCL12P48061 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.27□□□□□ -1.89
CXCL12P48061 AC008885.1-201ENST00000514930 301 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 AC087276.1-201ENST00000529659 480 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 OR4C2P-201ENST00000530855 1064 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 AC092851.1-201ENST00000535964 478 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms