Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.62□□□□□ -1.83
NKX2-1P43699 RN7SKP116-201ENST00000516902 319 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-1P43699 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-1P43699 OR5AK1P-201ENST00000524837 922 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-1P43699 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.62□□□□□ -1.83
NKX2-1P43699 AC135279.1-201ENST00000543493 504 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-1P43699 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-1P43699 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-1P43699 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-1P43699 AL109653.1-201ENST00000603091 248 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 AC087763.1-201ENST00000603391 286 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 AL139286.1-201ENST00000604465 483 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-1P43699 AC131235.4-201ENST00000609288 620 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-1P43699 AL139418.1-201ENST00000613613 177 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 AL354976.1-201ENST00000613843 387 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 AC073968.1-201ENST00000618594 637 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 MIR4727-201ENST00000622232 55 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 AC019278.1-201ENST00000623516 479 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 AC004943.3-201ENST00000624116 600 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-1P43699 U3.53-201ENST00000628922 216 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 AC116618.1-201ENST00000634617 774 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.62□□□□□ -1.83
NKX2-1P43699 LINC00622-201ENST00000562811 1570 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-1P43699 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-1P43699 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NKX2-1P43699 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-1P43699 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NKX2-1P43699 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
NKX2-1P43699 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NKX2-1P43699 AC053481.2-202ENST00000582394 1500 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NKX2-1P43699 RN7SKP95-201ENST00000362860 303 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 SNORA71.2-201ENST00000364941 134 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
NKX2-1P43699 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NKX2-1P43699 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-1P43699 MT-TC-201ENST00000387405 66 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 ARF4P3-201ENST00000397387 509 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NKX2-1P43699 MIR1178-201ENST00000408396 91 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 MIR1911-201ENST00000410783 80 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 RNA5SP39-201ENST00000411245 120 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.61□□□□□ -1.83
NKX2-1P43699 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-1P43699 CHEK2P3-201ENST00000416118 248 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-1P43699 AC012065.2-201ENST00000421295 375 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 AL049610.1-201ENST00000423374 372 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.61□□□□□ -1.83
NKX2-1P43699 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-1P43699 ABCF2P2-201ENST00000450549 296 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 AC012671.1-201ENST00000451912 203 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 TRGVB-201ENST00000453257 471 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.61□□□□□ -1.83
NKX2-1P43699 AL645939.1-201ENST00000453429 797 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 USP9YP34-201ENST00000453983 808 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-1P43699 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-1P43699 AL136126.1-201ENST00000473603 402 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 AC074386.1-201ENST00000476560 767 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 NCOR1P1-202ENST00000486162 291 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 RPS4XP14-201ENST00000493072 781 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-1P43699 AC108145.1-201ENST00000503770 153 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 AC093767.1-201ENST00000504523 156 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.61□□□□□ -1.83
NKX2-1P43699 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-1P43699 AC117522.2-201ENST00000510049 657 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.61□□□□□ -1.83
NKX2-1P43699 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-1P43699 AP003385.6-201ENST00000531603 374 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 AL356057.1-201ENST00000533798 831 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 AC135001.1-201ENST00000544546 283 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-1P43699 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.61□□□□□ -1.83
NKX2-1P43699 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.61□□□□□ -1.83
NKX2-1P43699 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.61□□□□□ -1.83
NKX2-1P43699 AC110760.3-201ENST00000598794 467 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 AC083899.3-201ENST00000603413 594 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 SDR42E1P1-201ENST00000611327 477 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 AC004223.4-201ENST00000612426 332 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 AC243773.3-201ENST00000613270 256 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 AC122133.1-201ENST00000613964 233 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 AC090116.1-201ENST00000615679 446 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 AC233309.1-201ENST00000619522 751 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.61□□□□□ -1.83
NKX2-1P43699 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.61□□□□□ -1.83
NKX2-1P43699 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NKX2-1P43699 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NKX2-1P43699 AC012020.1-201ENST00000624541 1728 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms