Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL4A5P29400 AC046144.1-201ENST00000478559 1853 ntBASIC3.42□□□□□ -1.86
COL4A5P29400 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
COL4A5P29400 RPL7P26-201ENST00000333817 754 ntBASIC3.42□□□□□ -1.86
COL4A5P29400 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL4A5P29400 RNA5SP508-201ENST00000411327 119 ntBASIC3.42□□□□□ -1.86
COL4A5P29400 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.42□□□□□ -1.86
COL4A5P29400 AC135999.1-201ENST00000478962 479 ntBASIC3.42□□□□□ -1.86
COL4A5P29400 ANXA2P1-201ENST00000505539 926 ntBASIC3.42□□□□□ -1.86
COL4A5P29400 ASNSP4-201ENST00000511103 447 ntBASIC3.42□□□□□ -1.86
COL4A5P29400 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.42□□□□□ -1.86
COL4A5P29400 AC008507.1-201ENST00000587506 734 ntBASIC3.42□□□□□ -1.86
COL4A5P29400 ELF2P3-201ENST00000445099 1506 ntBASIC3.42□□□□□ -1.86
COL4A5P29400 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
COL4A5P29400 GABRG2-229ENST00000641017 3628 ntBASIC3.42□□□□□ -1.86
COL4A5P29400 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.41□□□□□ -1.86
COL4A5P29400 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL4A5P29400 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
COL4A5P29400 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.41□□□□□ -1.86
COL4A5P29400 RNA5SP68-201ENST00000363885 119 ntBASIC3.41□□□□□ -1.86
COL4A5P29400 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL4A5P29400 HMGN1P18-201ENST00000457642 277 ntBASIC3.41□□□□□ -1.86
COL4A5P29400 AC010401.1-201ENST00000463867 348 ntBASIC3.41□□□□□ -1.86
COL4A5P29400 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.41□□□□□ -1.86
COL4A5P29400 RNA5SP24-201ENST00000516478 95 ntBASIC3.41□□□□□ -1.86
COL4A5P29400 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL4A5P29400 AC064859.1-201ENST00000624741 174 ntBASIC3.41□□□□□ -1.86
COL4A5P29400 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL4A5P29400 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL4A5P29400 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL4A5P29400 AC007336.1-201ENST00000576365 3828 ntBASIC3.41□□□□□ -1.86
COL4A5P29400 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
COL4A5P29400 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
COL4A5P29400 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
COL4A5P29400 MAPK10-362ENST00000641864 4484 ntBASIC3.4□□□□□ -1.86
COL4A5P29400 RNA5SP289-201ENST00000362332 137 ntBASIC3.4□□□□□ -1.86
COL4A5P29400 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.4□□□□□ -1.86
COL4A5P29400 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.4□□□□□ -1.86
COL4A5P29400 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.4□□□□□ -1.86
COL4A5P29400 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.4□□□□□ -1.86
COL4A5P29400 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.4□□□□□ -1.86
COL4A5P29400 AC090525.1-201ENST00000479116 478 ntBASIC3.4□□□□□ -1.86
COL4A5P29400 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
COL4A5P29400 SUMO2P4-201ENST00000504193 276 ntBASIC3.4□□□□□ -1.86
COL4A5P29400 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
COL4A5P29400 RNU6-1334P-201ENST00000516032 105 ntBASIC3.4□□□□□ -1.86
COL4A5P29400 RNA5SP148-201ENST00000516527 94 ntBASIC3.4□□□□□ -1.86
COL4A5P29400 AC022882.1-201ENST00000532142 501 ntBASIC3.4□□□□□ -1.86
COL4A5P29400 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.4□□□□□ -1.86
COL4A5P29400 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.4□□□□□ -1.86
COL4A5P29400 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.4□□□□□ -1.86
COL4A5P29400 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
COL4A5P29400 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
COL4A5P29400 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL4A5P29400 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL4A5P29400 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.4□□□□□ -1.87
COL4A5P29400 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL4A5P29400 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL4A5P29400 SNORA3.2-201ENST00000408221 125 ntBASIC3.39□□□□□ -1.87
COL4A5P29400 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL4A5P29400 AL603825.1-201ENST00000438481 80 ntBASIC3.39□□□□□ -1.87
COL4A5P29400 RPS20P32-201ENST00000456044 356 ntBASIC3.39□□□□□ -1.87
COL4A5P29400 ATP5F1P5-201ENST00000526403 760 ntBASIC3.39□□□□□ -1.87
COL4A5P29400 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL4A5P29400 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL4A5P29400 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
COL4A5P29400 AC013410.1-201ENST00000436223 1232 ntBASIC3.39□□□□□ -1.87
COL4A5P29400 AC126121.1-201ENST00000482313 553 ntBASIC3.39□□□□□ -1.87
COL4A5P29400 GOLGA5P1-201ENST00000507317 980 ntBASIC3.39□□□□□ -1.87
COL4A5P29400 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.39□□□□□ -1.87
COL4A5P29400 AP001636.2-201ENST00000525517 696 ntBASIC3.39□□□□□ -1.87
COL4A5P29400 AC008126.1-201ENST00000549019 480 ntBASIC3.39□□□□□ -1.87
COL4A5P29400 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.39□□□□□ -1.87
COL4A5P29400 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.39□□□□□ -1.87
COL4A5P29400 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.39□□□□□ -1.87
COL4A5P29400 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL4A5P29400 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL4A5P29400 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
COL4A5P29400 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL4A5P29400 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.38□□□□□ -1.87
COL4A5P29400 AC020633.1-201ENST00000468439 2247 ntBASIC3.38□□□□□ -1.87
COL4A5P29400 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL4A5P29400 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL4A5P29400 RPL23AP4-201ENST00000427757 463 ntBASIC3.38□□□□□ -1.87
COL4A5P29400 MTCO1P52-201ENST00000433928 531 ntBASIC3.38□□□□□ -1.87
COL4A5P29400 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.38□□□□□ -1.87
COL4A5P29400 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.38□□□□□ -1.87
COL4A5P29400 RNA5SP217-201ENST00000515959 91 ntBASIC3.38□□□□□ -1.87
COL4A5P29400 AC104027.1-201ENST00000521887 300 ntBASIC3.38□□□□□ -1.87
COL4A5P29400 AL390334.1-201ENST00000556395 450 ntBASIC3.38□□□□□ -1.87
COL4A5P29400 MIR4425-201ENST00000580572 84 ntBASIC3.38□□□□□ -1.87
COL4A5P29400 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.38□□□□□ -1.87
COL4A5P29400 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.38□□□□□ -1.87
COL4A5P29400 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL4A5P29400 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.38□□□□□ -1.87
COL4A5P29400 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL4A5P29400 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
COL4A5P29400 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL4A5P29400 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
COL4A5P29400 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms