Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL355812.1-201ENST00000603215 216 ntBASIC4.72□□□□□ -1.65
CD40P25942 AC025449.1-201ENST00000603896 529 ntBASIC4.72□□□□□ -1.65
CD40P25942 AL049634.3-201ENST00000604968 457 ntBASIC4.72□□□□□ -1.65
CD40P25942 AL445222.1-201ENST00000607259 628 ntBASIC4.72□□□□□ -1.65
CD40P25942 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.72□□□□□ -1.65
CD40P25942 uc_338.12-201ENST00000616344 181 ntBASIC4.72□□□□□ -1.65
CD40P25942 AP001784.1-201ENST00000624107 428 ntBASIC4.72□□□□□ -1.65
CD40P25942 MIR3662-201ENST00000637030 95 ntBASIC4.72□□□□□ -1.65
CD40P25942 AC074101.1-201ENST00000637861 241 ntBASIC4.72□□□□□ -1.65
CD40P25942 NMD3P1-201ENST00000439704 1488 ntBASIC4.72□□□□□ -1.65
CD40P25942 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
CD40P25942 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
CD40P25942 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD40P25942 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CD40P25942 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CD40P25942 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.72□□□□□ -1.65
CD40P25942 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD40P25942 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD40P25942 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CD40P25942 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD40P25942 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.65
CD40P25942 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD40P25942 C4BPAP1-201ENST00000415474 1893 ntBASIC4.71□□□□□ -1.66
CD40P25942 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.71□□□□□ -1.66
CD40P25942 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.71□□□□□ -1.66
CD40P25942 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.71□□□□□ -1.66
CD40P25942 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.71□□□□□ -1.66
CD40P25942 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.71□□□□□ -1.66
CD40P25942 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CD40P25942 RNU6-263P-201ENST00000363811 107 ntBASIC4.71□□□□□ -1.66
CD40P25942 RNU5A-8P-201ENST00000364102 114 ntBASIC4.71□□□□□ -1.66
CD40P25942 RNY3P13-201ENST00000365542 102 ntBASIC4.71□□□□□ -1.66
CD40P25942 AC019155.1-201ENST00000382242 574 ntBASIC4.71□□□□□ -1.66
CD40P25942 MIR105-2-201ENST00000385083 81 ntBASIC4.71□□□□□ -1.66
CD40P25942 RPS4XP8-201ENST00000402039 771 ntBASIC4.71□□□□□ -1.66
CD40P25942 RNU2-9P-201ENST00000410194 145 ntBASIC4.71□□□□□ -1.66
CD40P25942 RNU2-47P-201ENST00000410649 186 ntBASIC4.71□□□□□ -1.66
CD40P25942 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.71□□□□□ -1.66
CD40P25942 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.71□□□□□ -1.66
CD40P25942 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.71□□□□□ -1.66
CD40P25942 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.71□□□□□ -1.66
CD40P25942 AC137499.1-201ENST00000427602 88 ntBASIC4.71□□□□□ -1.66
CD40P25942 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.71□□□□□ -1.66
CD40P25942 USP9YP9-201ENST00000429406 715 ntBASIC4.71□□□□□ -1.66
CD40P25942 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD40P25942 GPR143P-201ENST00000434155 205 ntBASIC4.71□□□□□ -1.66
CD40P25942 LYPLA1P1-201ENST00000434514 622 ntBASIC4.71□□□□□ -1.66
CD40P25942 RPS11P7-201ENST00000442125 465 ntBASIC4.71□□□□□ -1.66
CD40P25942 SNRPEP8-201ENST00000442866 260 ntBASIC4.71□□□□□ -1.66
CD40P25942 TPT1P14-201ENST00000448018 505 ntBASIC4.71□□□□□ -1.66
CD40P25942 FDX1P2-201ENST00000450769 375 ntBASIC4.71□□□□□ -1.66
CD40P25942 AZGP1P2-201ENST00000454506 345 ntBASIC4.71□□□□□ -1.66
CD40P25942 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.71□□□□□ -1.66
CD40P25942 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.71□□□□□ -1.66
CD40P25942 snoU13.29-201ENST00000459370 104 ntBASIC4.71□□□□□ -1.66
CD40P25942 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.71□□□□□ -1.66
CD40P25942 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.71□□□□□ -1.66
CD40P25942 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.71□□□□□ -1.66
CD40P25942 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.71□□□□□ -1.66
CD40P25942 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.71□□□□□ -1.66
CD40P25942 RNA5SP92-201ENST00000516437 110 ntBASIC4.71□□□□□ -1.66
CD40P25942 SNORA20.3-201ENST00000516880 132 ntBASIC4.71□□□□□ -1.66
CD40P25942 AC090572.1-201ENST00000519251 160 ntBASIC4.71□□□□□ -1.66
CD40P25942 OR10G5P-201ENST00000532733 358 ntBASIC4.71□□□□□ -1.66
CD40P25942 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.71□□□□□ -1.66
CD40P25942 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.71□□□□□ -1.66
CD40P25942 AL359212.1-201ENST00000556608 614 ntBASIC4.71□□□□□ -1.66
CD40P25942 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.71□□□□□ -1.66
CD40P25942 AC051619.2-201ENST00000559063 397 ntBASIC4.71□□□□□ -1.66
CD40P25942 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.71□□□□□ -1.66
CD40P25942 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.71□□□□□ -1.66
CD40P25942 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.71□□□□□ -1.66
CD40P25942 COX6CP3-201ENST00000580869 223 ntBASIC4.71□□□□□ -1.66
CD40P25942 AC060780.3-201ENST00000589464 80 ntBASIC4.71□□□□□ -1.66
CD40P25942 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.71□□□□□ -1.66
CD40P25942 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.71□□□□□ -1.66
CD40P25942 AL162413.1-201ENST00000603198 110 ntBASIC4.71□□□□□ -1.66
CD40P25942 AP003117.2-201ENST00000606010 545 ntBASIC4.71□□□□□ -1.66
CD40P25942 AL008729.2-201ENST00000606393 473 ntBASIC4.71□□□□□ -1.66
CD40P25942 AC007038.2-201ENST00000608095 740 ntBASIC4.71□□□□□ -1.66
CD40P25942 BX323046.1-201ENST00000610145 535 ntBASIC4.71□□□□□ -1.66
CD40P25942 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD40P25942 AC063943.3-201ENST00000615562 356 ntBASIC4.71□□□□□ -1.66
CD40P25942 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.71□□□□□ -1.66
CD40P25942 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD40P25942 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD40P25942 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
CD40P25942 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD40P25942 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD40P25942 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD40P25942 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD40P25942 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD40P25942 AC104964.3-201ENST00000606115 2860 ntBASIC4.71□□□□□ -1.66
CD40P25942 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.71□□□□□ -1.66
CD40P25942 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.7□□□□□ -1.66
CD40P25942 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.7□□□□□ -1.66
CD40P25942 ZNF33CP-201ENST00000432492 2030 ntBASIC4.7□□□□□ -1.66
CD40P25942 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.7□□□□□ -1.66
CD40P25942 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms