Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.91□□□□□ -1.62
POLR2AP24928 AL078595.2-201ENST00000605309 1780 ntBASIC4.91□□□□□ -1.62
POLR2AP24928 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
POLR2AP24928 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
POLR2AP24928 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
POLR2AP24928 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
POLR2AP24928 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
POLR2AP24928 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
POLR2AP24928 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
POLR2AP24928 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
POLR2AP24928 FGF7P2-201ENST00000332473 296 ntBASIC4.9□□□□□ -1.63
POLR2AP24928 MIR218-2-201ENST00000385006 110 ntBASIC4.9□□□□□ -1.63
POLR2AP24928 AL590002.1-201ENST00000406554 418 ntBASIC4.9□□□□□ -1.63
POLR2AP24928 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.9□□□□□ -1.63
POLR2AP24928 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.9□□□□□ -1.63
POLR2AP24928 GTF2IP23-201ENST00000423746 351 ntBASIC4.9□□□□□ -1.63
POLR2AP24928 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.9□□□□□ -1.63
POLR2AP24928 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.9□□□□□ -1.63
POLR2AP24928 MTND1P16-201ENST00000465177 898 ntBASIC4.9□□□□□ -1.63
POLR2AP24928 FCF1P3-201ENST00000496394 590 ntBASIC4.9□□□□□ -1.63
POLR2AP24928 AC124293.1-201ENST00000530034 493 ntBASIC4.9□□□□□ -1.63
POLR2AP24928 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.9□□□□□ -1.63
POLR2AP24928 MIR4666A-201ENST00000580160 79 ntBASIC4.9□□□□□ -1.63
POLR2AP24928 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.9□□□□□ -1.63
POLR2AP24928 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.9□□□□□ -1.63
POLR2AP24928 AL031658.2-201ENST00000616850 651 ntBASIC4.9□□□□□ -1.63
POLR2AP24928 AC243756.2-201ENST00000618406 463 ntBASIC4.9□□□□□ -1.63
POLR2AP24928 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
POLR2AP24928 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.9□□□□□ -1.63
POLR2AP24928 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
POLR2AP24928 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
POLR2AP24928 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
POLR2AP24928 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
POLR2AP24928 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.89□□□□□ -1.63
POLR2AP24928 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
POLR2AP24928 AC024560.2-201ENST00000507981 1497 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
POLR2AP24928 RNA5SP97-201ENST00000365006 84 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 MIR491-201ENST00000384877 84 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 MTND1P14-201ENST00000427400 950 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.89□□□□□ -1.63
POLR2AP24928 MTCO1P3-201ENST00000429327 192 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.89□□□□□ -1.63
POLR2AP24928 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.89□□□□□ -1.63
POLR2AP24928 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR2AP24928 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR2AP24928 AP000542.1-201ENST00000448473 371 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.89□□□□□ -1.63
POLR2AP24928 SEPT7P3-201ENST00000455017 621 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 MTND6P6-201ENST00000478031 263 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 AC037198.2-201ENST00000478845 733 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR2AP24928 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR2AP24928 RNA5SP360-201ENST00000516555 118 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 OR4R3P-201ENST00000525084 838 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR2AP24928 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR2AP24928 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR2AP24928 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.89□□□□□ -1.63
POLR2AP24928 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.89□□□□□ -1.63
POLR2AP24928 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.89□□□□□ -1.63
POLR2AP24928 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.89□□□□□ -1.63
POLR2AP24928 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
POLR2AP24928 AL606490.9-201ENST00000603331 271 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 IMMP1LP1-201ENST00000605170 488 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 RNA5SP439-201ENST00000617595 124 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 AL034408.1-202ENST00000636088 415 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
POLR2AP24928 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
POLR2AP24928 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.89□□□□□ -1.63
POLR2AP24928 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
POLR2AP24928 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.89□□□□□ -1.63
POLR2AP24928 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
POLR2AP24928 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
POLR2AP24928 RNU6-353P-201ENST00000364266 108 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 MIR181A1-201ENST00000385026 110 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 RN7SKP285-201ENST00000410137 318 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.89□□□□□ -1.63
POLR2AP24928 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR2AP24928 EIF1P3-201ENST00000423841 334 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.89□□□□□ -1.63
POLR2AP24928 AC073522.1-201ENST00000483312 377 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 AC106038.2-201ENST00000520706 568 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.89□□□□□ -1.63
POLR2AP24928 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR2AP24928 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.89□□□□□ -1.63
POLR2AP24928 AC008966.2-201ENST00000606157 453 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 AP000238.1-201ENST00000608759 426 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 AL356596.1-201ENST00000624230 379 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
POLR2AP24928 AL138820.1-201ENST00000617901 5305 ntBASIC4.89□□□□□ -1.63
POLR2AP24928 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
POLR2AP24928 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.89□□□□□ -1.63
POLR2AP24928 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
POLR2AP24928 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
POLR2AP24928 AC068870.3-201ENST00000625077 2536 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
POLR2AP24928 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
POLR2AP24928 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms