Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SDC1P18827 AC007656.2-201ENST00000624902 4547 ntBASIC3.48□□□□□ -1.85
SDC1P18827 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SDC1P18827 AL645568.2-201ENST00000432815 1337 ntBASIC3.47□□□□□ -1.85
SDC1P18827 RPS4XP5-202ENST00000449995 1334 ntBASIC3.47□□□□□ -1.85
SDC1P18827 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SDC1P18827 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.47□□□□□ -1.85
SDC1P18827 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.47□□□□□ -1.85
SDC1P18827 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SDC1P18827 XIAPP3-201ENST00000312918 795 ntBASIC3.47□□□□□ -1.85
SDC1P18827 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SDC1P18827 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SDC1P18827 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SDC1P18827 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.47□□□□□ -1.85
SDC1P18827 RNU6-298P-201ENST00000390888 96 ntBASIC3.47□□□□□ -1.85
SDC1P18827 SNORA57.3-201ENST00000411095 141 ntBASIC3.47□□□□□ -1.85
SDC1P18827 LIPT1P1-201ENST00000415870 1186 ntBASIC3.47□□□□□ -1.85
SDC1P18827 USP9YP21-201ENST00000420603 432 ntBASIC3.47□□□□□ -1.85
SDC1P18827 RPL7P53-201ENST00000421245 739 ntBASIC3.47□□□□□ -1.85
SDC1P18827 AC009237.2-201ENST00000421358 284 ntBASIC3.47□□□□□ -1.85
SDC1P18827 AL354692.1-201ENST00000423044 315 ntBASIC3.47□□□□□ -1.85
SDC1P18827 FTH1P6-201ENST00000430768 320 ntBASIC3.47□□□□□ -1.85
SDC1P18827 HSFY7P-201ENST00000432672 318 ntBASIC3.47□□□□□ -1.85
SDC1P18827 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.47□□□□□ -1.85
SDC1P18827 HSFY8P-201ENST00000437934 318 ntBASIC3.47□□□□□ -1.85
SDC1P18827 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.47□□□□□ -1.85
SDC1P18827 H2AFZP6-201ENST00000444403 394 ntBASIC3.47□□□□□ -1.85
SDC1P18827 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SDC1P18827 HSFY5P-201ENST00000453726 309 ntBASIC3.47□□□□□ -1.85
SDC1P18827 AL133162.1-201ENST00000463228 453 ntBASIC3.47□□□□□ -1.85
SDC1P18827 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.47□□□□□ -1.85
SDC1P18827 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.47□□□□□ -1.85
SDC1P18827 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.47□□□□□ -1.85
SDC1P18827 AC118282.2-201ENST00000508739 374 ntBASIC3.47□□□□□ -1.85
SDC1P18827 AC008837.1-201ENST00000511513 412 ntBASIC3.47□□□□□ -1.85
SDC1P18827 AC010374.2-201ENST00000512933 535 ntBASIC3.47□□□□□ -1.85
SDC1P18827 AC016065.2-201ENST00000514530 444 ntBASIC3.47□□□□□ -1.85
SDC1P18827 RNU6-488P-201ENST00000515918 99 ntBASIC3.47□□□□□ -1.85
SDC1P18827 MIR2116-201ENST00000517221 80 ntBASIC3.47□□□□□ -1.85
SDC1P18827 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.47□□□□□ -1.85
SDC1P18827 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.47□□□□□ -1.85
SDC1P18827 TOMM20P2-201ENST00000540082 421 ntBASIC3.47□□□□□ -1.85
SDC1P18827 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.47□□□□□ -1.85
SDC1P18827 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SDC1P18827 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.47□□□□□ -1.85
SDC1P18827 AGGF1P6-201ENST00000569213 976 ntBASIC3.47□□□□□ -1.85
SDC1P18827 MIR5187-201ENST00000583479 76 ntBASIC3.47□□□□□ -1.85
SDC1P18827 AC090330.1-201ENST00000588646 764 ntBASIC3.47□□□□□ -1.85
SDC1P18827 AC083899.3-201ENST00000603413 594 ntBASIC3.47□□□□□ -1.85
SDC1P18827 AP000238.1-201ENST00000608759 426 ntBASIC3.47□□□□□ -1.85
SDC1P18827 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SDC1P18827 U7.8-201ENST00000619968 63 ntBASIC3.47□□□□□ -1.85
SDC1P18827 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.47□□□□□ -1.85
SDC1P18827 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SDC1P18827 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SDC1P18827 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.47□□□□□ -1.85
SDC1P18827 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SDC1P18827 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.46□□□□□ -1.85
SDC1P18827 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SDC1P18827 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SDC1P18827 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
SDC1P18827 EXOC5P1-201ENST00000510543 1969 ntBASIC3.46□□□□□ -1.86
SDC1P18827 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SDC1P18827 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
SDC1P18827 RNU6-236P-201ENST00000363886 106 ntBASIC3.46□□□□□ -1.86
SDC1P18827 SNORA70.2-201ENST00000364506 135 ntBASIC3.46□□□□□ -1.86
SDC1P18827 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.46□□□□□ -1.86
SDC1P18827 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
SDC1P18827 SNORA11B-201ENST00000408175 129 ntBASIC3.46□□□□□ -1.86
SDC1P18827 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SDC1P18827 RN7SKP177-201ENST00000410567 355 ntBASIC3.46□□□□□ -1.86
SDC1P18827 RNU6-628P-201ENST00000410675 107 ntBASIC3.46□□□□□ -1.86
SDC1P18827 BTF3P8-201ENST00000414577 526 ntBASIC3.46□□□□□ -1.86
SDC1P18827 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.46□□□□□ -1.86
SDC1P18827 AC008280.1-201ENST00000418851 412 ntBASIC3.46□□□□□ -1.86
SDC1P18827 COX6CP17-201ENST00000421389 185 ntBASIC3.46□□□□□ -1.86
SDC1P18827 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.46□□□□□ -1.86
SDC1P18827 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.46□□□□□ -1.86
SDC1P18827 RPL7P59-201ENST00000447700 943 ntBASIC3.46□□□□□ -1.86
SDC1P18827 TPT1P12-201ENST00000448968 492 ntBASIC3.46□□□□□ -1.86
SDC1P18827 AC010655.1-201ENST00000449336 292 ntBASIC3.46□□□□□ -1.86
SDC1P18827 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.46□□□□□ -1.86
SDC1P18827 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.46□□□□□ -1.86
SDC1P18827 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SDC1P18827 NF1P3-201ENST00000457709 450 ntBASIC3.46□□□□□ -1.86
SDC1P18827 AC018635.1-201ENST00000468292 1030 ntBASIC3.46□□□□□ -1.86
SDC1P18827 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.46□□□□□ -1.86
SDC1P18827 AC084357.1-201ENST00000473404 255 ntBASIC3.46□□□□□ -1.86
SDC1P18827 AP000926.1-201ENST00000479573 241 ntBASIC3.46□□□□□ -1.86
SDC1P18827 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.46□□□□□ -1.86
SDC1P18827 AC011352.3-201ENST00000505162 593 ntBASIC3.46□□□□□ -1.86
SDC1P18827 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.46□□□□□ -1.86
SDC1P18827 AC109471.1-201ENST00000511631 612 ntBASIC3.46□□□□□ -1.86
SDC1P18827 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SDC1P18827 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.46□□□□□ -1.86
SDC1P18827 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.46□□□□□ -1.86
SDC1P18827 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SDC1P18827 AC093853.1-201ENST00000515689 483 ntBASIC3.46□□□□□ -1.86
SDC1P18827 RN7SKP277-201ENST00000516895 283 ntBASIC3.46□□□□□ -1.86
SDC1P18827 snoZ278.1-201ENST00000517059 112 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms