Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.17□□□□□ -1.58
COL6A2P12110 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
COL6A2P12110 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.17□□□□□ -1.58
COL6A2P12110 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.17□□□□□ -1.58
COL6A2P12110 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL6A2P12110 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL6A2P12110 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL6A2P12110 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL6A2P12110 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
COL6A2P12110 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL6A2P12110 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL6A2P12110 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.16□□□□□ -1.58
COL6A2P12110 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL6A2P12110 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.16□□□□□ -1.58
COL6A2P12110 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL6A2P12110 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL6A2P12110 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL6A2P12110 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL6A2P12110 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COL6A2P12110 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COL6A2P12110 MIR323A-201ENST00000362199 86 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.16□□□□□ -1.58
COL6A2P12110 RNU6-483P-201ENST00000384088 108 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 RN7SKP16-201ENST00000410180 299 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL6A2P12110 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.16□□□□□ -1.58
COL6A2P12110 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COL6A2P12110 AL353777.1-201ENST00000425552 326 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 RPL35AP21-201ENST00000437667 333 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.16□□□□□ -1.58
COL6A2P12110 AL391987.1-201ENST00000441025 200 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 RPL23AP20-201ENST00000447965 421 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 RPL31P15-201ENST00000449770 338 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 AC104634.1-201ENST00000452720 462 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.16□□□□□ -1.58
COL6A2P12110 RNA5SP103-201ENST00000459503 118 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.16□□□□□ -1.58
COL6A2P12110 AC005726.1-201ENST00000494679 427 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 AC091951.2-201ENST00000500762 203 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.16□□□□□ -1.58
COL6A2P12110 AC106872.4-201ENST00000510050 523 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.16□□□□□ -1.58
COL6A2P12110 RNA5SP464-201ENST00000516251 108 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.16□□□□□ -1.58
COL6A2P12110 AC105031.1-201ENST00000518550 476 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.16□□□□□ -1.58
COL6A2P12110 MTND1P35-201ENST00000526739 508 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 AC107918.3-201ENST00000533272 382 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.16□□□□□ -1.58
COL6A2P12110 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.16□□□□□ -1.58
COL6A2P12110 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.16□□□□□ -1.58
COL6A2P12110 UBE2V2P2-201ENST00000587677 504 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
COL6A2P12110 RPL12P25-202ENST00000598100 674 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 BBIP1P1-201ENST00000602999 279 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 AC012507.3-201ENST00000603556 477 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL6A2P12110 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.16□□□□□ -1.58
COL6A2P12110 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.16□□□□□ -1.58
COL6A2P12110 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.16□□□□□ -1.58
COL6A2P12110 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.16□□□□□ -1.58
COL6A2P12110 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL6A2P12110 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL6A2P12110 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.16□□□□□ -1.58
COL6A2P12110 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
COL6A2P12110 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.15□□□□□ -1.58
COL6A2P12110 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.15□□□□□ -1.58
COL6A2P12110 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL6A2P12110 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL6A2P12110 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL6A2P12110 KPNA2P2-201ENST00000419546 1489 ntBASIC5.15□□□□□ -1.58
COL6A2P12110 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.15□□□□□ -1.58
COL6A2P12110 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.15□□□□□ -1.58
COL6A2P12110 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL6A2P12110 RNA5SP335-201ENST00000363817 110 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 RNU6-744P-201ENST00000365557 107 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 Y_RNA.409-201ENST00000383990 98 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 RNU6-1316P-201ENST00000384242 108 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 OR4K12P-201ENST00000406538 961 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 AMD1P2-201ENST00000412936 992 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 AC016831.2-201ENST00000417179 352 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 ZNF90P2-204ENST00000419323 1075 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 AL031736.2-201ENST00000426573 787 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.15□□□□□ -1.59
COL6A2P12110 COX6CP13-201ENST00000428703 226 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 RPL31P35-201ENST00000431058 377 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.15□□□□□ -1.59
COL6A2P12110 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.15□□□□□ -1.59
COL6A2P12110 AC064862.4-201ENST00000442180 334 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.15□□□□□ -1.59
COL6A2P12110 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.15□□□□□ -1.59
COL6A2P12110 CEACAMP9-201ENST00000442990 513 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 HSPE1P28-201ENST00000443139 211 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.15□□□□□ -1.59
COL6A2P12110 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.15□□□□□ -1.59
COL6A2P12110 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.15□□□□□ -1.59
COL6A2P12110 MTND1P12-201ENST00000455231 147 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 AC108161.1-201ENST00000461060 402 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 PPIAP19-201ENST00000486414 492 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms