Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SETP10-201ENST00000424368 814 ntBASIC3.32□□□□□ -1.88
COL11A1P12107 RPL21P40-201ENST00000428586 483 ntBASIC3.32□□□□□ -1.88
COL11A1P12107 AC010468.1-201ENST00000461022 817 ntBASIC3.32□□□□□ -1.88
COL11A1P12107 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.32□□□□□ -1.88
COL11A1P12107 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.32□□□□□ -1.88
COL11A1P12107 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.32□□□□□ -1.88
COL11A1P12107 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL11A1P12107 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.32□□□□□ -1.88
COL11A1P12107 RPL12P50-201ENST00000603116 116 ntBASIC3.32□□□□□ -1.88
COL11A1P12107 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
COL11A1P12107 MTCO1P8-201ENST00000416914 1523 ntBASIC3.32□□□□□ -1.88
COL11A1P12107 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL11A1P12107 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.32□□□□□ -1.88
COL11A1P12107 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL11A1P12107 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
COL11A1P12107 MTND5P23-201ENST00000430812 1655 ntBASIC3.31□□□□□ -1.88
COL11A1P12107 RNA5SP293-201ENST00000410527 113 ntBASIC3.31□□□□□ -1.88
COL11A1P12107 BTF3P9-201ENST00000418784 283 ntBASIC3.31□□□□□ -1.88
COL11A1P12107 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.31□□□□□ -1.88
COL11A1P12107 AC108938.1-201ENST00000451204 136 ntBASIC3.31□□□□□ -1.88
COL11A1P12107 AC010486.1-201ENST00000511793 424 ntBASIC3.31□□□□□ -1.88
COL11A1P12107 RFPL4AP3-201ENST00000515267 345 ntBASIC3.31□□□□□ -1.88
COL11A1P12107 RN7SKP272-201ENST00000516988 232 ntBASIC3.31□□□□□ -1.88
COL11A1P12107 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.31□□□□□ -1.88
COL11A1P12107 AC079600.2-201ENST00000550076 130 ntBASIC3.31□□□□□ -1.88
COL11A1P12107 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.31□□□□□ -1.88
COL11A1P12107 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL11A1P12107 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL11A1P12107 AC104446.1-201ENST00000613728 1321 ntBASIC3.31□□□□□ -1.88
COL11A1P12107 AC093010.3-201ENST00000570269 15214 ntBASIC3.31□□□□□ -1.88
COL11A1P12107 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
COL11A1P12107 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
COL11A1P12107 SNORA46-201ENST00000384762 135 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 MIR9-1-201ENST00000385198 89 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 AL645937.1-202ENST00000421799 937 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.3□□□□□ -1.88
COL11A1P12107 RPL7P36-201ENST00000444633 681 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.3□□□□□ -1.88
COL11A1P12107 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.3□□□□□ -1.88
COL11A1P12107 AC114967.1-201ENST00000504890 259 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 AC093755.1-201ENST00000512950 1023 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.3□□□□□ -1.88
COL11A1P12107 AC103783.1-201ENST00000520506 373 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 AL390838.2-201ENST00000602394 274 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.3□□□□□ -1.88
COL11A1P12107 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.3□□□□□ -1.88
COL11A1P12107 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL11A1P12107 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.3□□□□□ -1.88
COL11A1P12107 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
COL11A1P12107 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
COL11A1P12107 RNU1-75P-201ENST00000347264 129 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL11A1P12107 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.3□□□□□ -1.88
COL11A1P12107 RNU6-851P-201ENST00000384565 107 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 AL356057.1-202ENST00000402263 756 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 RN7SKP285-201ENST00000410137 318 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 SNORA79B-201ENST00000410557 148 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 HMGN2P7-201ENST00000456186 273 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 SNORD109B-201ENST00000458961 67 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 SNORD109A-201ENST00000459128 67 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 AC128713.1-201ENST00000471495 306 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 AC090525.1-201ENST00000479116 478 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 SETP12-201ENST00000514068 805 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.3□□□□□ -1.88
COL11A1P12107 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.3□□□□□ -1.88
COL11A1P12107 ELOCP29-201ENST00000588193 334 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 AC104763.2-201ENST00000604179 382 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 AC136601.2-201ENST00000604356 474 ntBASIC3.3□□□□□ -1.88
COL11A1P12107 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
COL11A1P12107 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL11A1P12107 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL11A1P12107 RNU4-82P-201ENST00000362443 140 ntBASIC3.29□□□□□ -1.88
COL11A1P12107 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
COL11A1P12107 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
COL11A1P12107 MIR34A-201ENST00000385130 110 ntBASIC3.29□□□□□ -1.88
COL11A1P12107 BMS1P22-201ENST00000414726 313 ntBASIC3.29□□□□□ -1.88
COL11A1P12107 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.29□□□□□ -1.88
COL11A1P12107 HMGB3P8-201ENST00000449709 577 ntBASIC3.29□□□□□ -1.88
COL11A1P12107 CYCSP20-201ENST00000473154 315 ntBASIC3.29□□□□□ -1.88
COL11A1P12107 RN7SL432P-201ENST00000484057 298 ntBASIC3.29□□□□□ -1.88
COL11A1P12107 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.29□□□□□ -1.88
COL11A1P12107 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.29□□□□□ -1.88
COL11A1P12107 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.29□□□□□ -1.88
COL11A1P12107 AC016542.2-201ENST00000624201 619 ntBASIC3.29□□□□□ -1.88
COL11A1P12107 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COL11A1P12107 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL11A1P12107 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL11A1P12107 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.29□□□□□ -1.88
COL11A1P12107 ASNSP1-201ENST00000518311 1939 ntBASIC3.29□□□□□ -1.88
COL11A1P12107 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL11A1P12107 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.88
COL11A1P12107 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL11A1P12107 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL11A1P12107 RNA5SP21-201ENST00000410917 96 ntBASIC3.28□□□□□ -1.88
COL11A1P12107 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.28□□□□□ -1.88
COL11A1P12107 AC006960.1-201ENST00000419980 153 ntBASIC3.28□□□□□ -1.88
COL11A1P12107 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.28□□□□□ -1.88
COL11A1P12107 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.28□□□□□ -1.88
COL11A1P12107 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.28□□□□□ -1.88
COL11A1P12107 AC005351.1-201ENST00000511152 786 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms