Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
HLA-DQB2P05538 AC073325.2-201ENST00000339545 159 ntBASIC3.13□□□□□ -1.91
HLA-DQB2P05538 SNORA54-201ENST00000384281 123 ntBASIC3.13□□□□□ -1.91
HLA-DQB2P05538 SNORD15B-201ENST00000384714 146 ntBASIC3.13□□□□□ -1.91
HLA-DQB2P05538 HMGB3P23-201ENST00000414981 585 ntBASIC3.13□□□□□ -1.91
HLA-DQB2P05538 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQB2P05538 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQB2P05538 ARF4P2-201ENST00000430209 526 ntBASIC3.13□□□□□ -1.91
HLA-DQB2P05538 MTCO3P17-201ENST00000443775 513 ntBASIC3.13□□□□□ -1.91
HLA-DQB2P05538 RPL31P20-201ENST00000449593 360 ntBASIC3.13□□□□□ -1.91
HLA-DQB2P05538 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DQB2P05538 CEACAMP4-201ENST00000457676 421 ntBASIC3.13□□□□□ -1.91
HLA-DQB2P05538 RPL5P13-201ENST00000462840 709 ntBASIC3.13□□□□□ -1.91
HLA-DQB2P05538 RN7SL20P-201ENST00000488827 297 ntBASIC3.13□□□□□ -1.91
HLA-DQB2P05538 TRAV31-201ENST00000502780 342 ntBASIC3.13□□□□□ -1.91
HLA-DQB2P05538 AC021146.5-201ENST00000503544 545 ntBASIC3.13□□□□□ -1.91
HLA-DQB2P05538 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DQB2P05538 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.13□□□□□ -1.91
HLA-DQB2P05538 OR4A2P-201ENST00000527276 913 ntBASIC3.13□□□□□ -1.91
HLA-DQB2P05538 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQB2P05538 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DQB2P05538 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DQB2P05538 AC092628.2-201ENST00000622492 339 ntBASIC3.13□□□□□ -1.91
HLA-DQB2P05538 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HLA-DQB2P05538 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
HLA-DQB2P05538 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQB2P05538 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQB2P05538 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DQB2P05538 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HLA-DQB2P05538 AC096656.1-201ENST00000623826 1364 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 SYT14P1-202ENST00000600441 1448 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 SNORA38.1-201ENST00000364172 131 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 GSTA8P-201ENST00000404253 637 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 MTCO3P31-201ENST00000405526 789 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 LINC01881-201ENST00000416103 412 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 UBE2V1P1-201ENST00000430836 445 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC104978.1-201ENST00000449387 391 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 CFTRP1-201ENST00000456646 183 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC012170.1-201ENST00000495139 359 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC023050.1-201ENST00000498198 304 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 TXNP6-201ENST00000510190 310 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 SEC11B-201ENST00000518383 499 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 IGKV2-23-201ENST00000518729 323 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC068657.1-201ENST00000520807 306 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC025857.1-201ENST00000525252 377 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC010680.4-201ENST00000605334 543 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC084036.1-201ENST00000609190 508 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AL391834.1-201ENST00000609609 560 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC117490.2-201ENST00000610042 594 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC096577.2-201ENST00000611455 153 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AL450489.1-201ENST00000612071 468 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AL356490.1-201ENST00000623079 479 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC007342.8-201ENST00000623278 678 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC004943.3-201ENST00000624116 600 ntBASIC3.12□□□□□ -1.91
HLA-DQB2P05538 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQB2P05538 AC087565.3-202ENST00000642085 1603 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 MIR148B-201ENST00000362252 99 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 RNA5SP374-201ENST00000362939 125 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 SNORA46-201ENST00000384762 135 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 MIR124-3-201ENST00000384866 87 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 RPL7P25-201ENST00000404151 721 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 MTND4P11-201ENST00000417020 1058 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 AL392003.1-201ENST00000434394 243 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 B3GNT2P1-201ENST00000434960 952 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 BUD31P2-201ENST00000449374 300 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 AC093278.1-201ENST00000494700 600 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 AC245166.1-201ENST00000521012 253 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 AL389895.1-201ENST00000554127 252 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms