Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.92□□□□□ -1.78
CHRNA1P02708 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CHRNA1P02708 AC119744.1-201ENST00000454746 1715 ntBASIC3.92□□□□□ -1.78
CHRNA1P02708 AC046144.1-201ENST00000478559 1853 ntBASIC3.92□□□□□ -1.78
CHRNA1P02708 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CHRNA1P02708 AL133383.2-201ENST00000622958 2336 ntBASIC3.92□□□□□ -1.78
CHRNA1P02708 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CHRNA1P02708 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHRNA1P02708 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHRNA1P02708 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.91□□□□□ -1.78
CHRNA1P02708 RNA5SP391-201ENST00000363456 119 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 RNA5SP27-201ENST00000363839 119 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.91□□□□□ -1.78
CHRNA1P02708 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHRNA1P02708 AC092745.2-202ENST00000411880 369 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 HMGB3P31-201ENST00000413333 595 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 HSFY4P-201ENST00000415994 1181 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.91□□□□□ -1.78
CHRNA1P02708 SDCBPP2-201ENST00000424643 885 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.91□□□□□ -1.78
CHRNA1P02708 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CHRNA1P02708 CYCSP32-201ENST00000440548 321 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 AC068135.1-201ENST00000446164 246 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.91□□□□□ -1.78
CHRNA1P02708 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.91□□□□□ -1.78
CHRNA1P02708 AC115115.1-201ENST00000449927 248 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.91□□□□□ -1.78
CHRNA1P02708 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.91□□□□□ -1.78
CHRNA1P02708 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.91□□□□□ -1.78
CHRNA1P02708 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.91□□□□□ -1.78
CHRNA1P02708 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 AC104108.1-201ENST00000509930 412 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 AC133963.2-201ENST00000513686 578 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.91□□□□□ -1.78
CHRNA1P02708 RNU2-27P-201ENST00000516185 142 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 C1DP5-201ENST00000525775 383 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CHRNA1P02708 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.91□□□□□ -1.78
CHRNA1P02708 PTP4A1P6-201ENST00000531034 478 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.91□□□□□ -1.78
CHRNA1P02708 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.91□□□□□ -1.78
CHRNA1P02708 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.91□□□□□ -1.78
CHRNA1P02708 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.91□□□□□ -1.78
CHRNA1P02708 AP000919.1-202ENST00000581139 1264 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 AC011471.1-201ENST00000585766 187 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.91□□□□□ -1.78
CHRNA1P02708 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.91□□□□□ -1.78
CHRNA1P02708 AL445493.3-201ENST00000619568 477 ntBASIC3.91□□□□□ -1.78
CHRNA1P02708 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHRNA1P02708 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHRNA1P02708 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CHRNA1P02708 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CHRNA1P02708 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.91□□□□□ -1.78
CHRNA1P02708 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.9□□□□□ -1.78
CHRNA1P02708 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CHRNA1P02708 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.9□□□□□ -1.78
CHRNA1P02708 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CHRNA1P02708 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CHRNA1P02708 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CHRNA1P02708 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CHRNA1P02708 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CHRNA1P02708 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.9□□□□□ -1.79
CHRNA1P02708 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CHRNA1P02708 RNU6-796P-201ENST00000391086 107 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CHRNA1P02708 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.9□□□□□ -1.79
CHRNA1P02708 MTHFD2P2-201ENST00000407725 247 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.9□□□□□ -1.79
CHRNA1P02708 AC019070.1-201ENST00000415008 1024 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 USP12PY-201ENST00000427677 1064 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.9□□□□□ -1.79
CHRNA1P02708 RPS26P40-201ENST00000435209 294 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 AC005019.1-201ENST00000436455 431 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 RNFT1P2-201ENST00000443064 757 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 AC099563.1-201ENST00000456086 418 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 AC078785.3-201ENST00000476607 425 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.9□□□□□ -1.79
CHRNA1P02708 RPL21P103-201ENST00000479921 488 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.9□□□□□ -1.79
CHRNA1P02708 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.9□□□□□ -1.79
CHRNA1P02708 RPL7P47-201ENST00000497299 556 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.9□□□□□ -1.79
CHRNA1P02708 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.9□□□□□ -1.79
CHRNA1P02708 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.9□□□□□ -1.79
CHRNA1P02708 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.9□□□□□ -1.79
CHRNA1P02708 AC005351.1-201ENST00000511152 786 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.9□□□□□ -1.79
CHRNA1P02708 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.9□□□□□ -1.79
CHRNA1P02708 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.9□□□□□ -1.79
CHRNA1P02708 AP004242.1-201ENST00000533701 349 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.9□□□□□ -1.79
CHRNA1P02708 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.9□□□□□ -1.79
CHRNA1P02708 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.9□□□□□ -1.79
CHRNA1P02708 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.9□□□□□ -1.79
CHRNA1P02708 AC006270.2-201ENST00000578523 652 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.9□□□□□ -1.79
CHRNA1P02708 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.9□□□□□ -1.79
CHRNA1P02708 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.9□□□□□ -1.79
CHRNA1P02708 AC005000.2-201ENST00000605468 310 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 AP003392.5-201ENST00000607857 415 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms