Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.8□□□□□ -1.96
SNRNP200O75643 MIR7153-201ENST00000637758 57 ntBASIC2.8□□□□□ -1.96
SNRNP200O75643 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SNRNP200O75643 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNRNP200O75643 OR5BR1P-201ENST00000524992 1330 ntBASIC2.8□□□□□ -1.96
SNRNP200O75643 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SNRNP200O75643 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
SNRNP200O75643 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SNRNP200O75643 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SNRNP200O75643 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.8□□□□□ -1.96
SNRNP200O75643 NUP35P1-201ENST00000422734 947 ntBASIC2.8□□□□□ -1.96
SNRNP200O75643 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.8□□□□□ -1.96
SNRNP200O75643 AC245517.2-201ENST00000442890 346 ntBASIC2.8□□□□□ -1.96
SNRNP200O75643 AC125238.1-201ENST00000448842 249 ntBASIC2.8□□□□□ -1.96
SNRNP200O75643 SNORA59A-201ENST00000459326 152 ntBASIC2.8□□□□□ -1.96
SNRNP200O75643 AC087385.1-201ENST00000475062 312 ntBASIC2.8□□□□□ -1.96
SNRNP200O75643 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.8□□□□□ -1.96
SNRNP200O75643 GTF3AP2-201ENST00000557014 266 ntBASIC2.8□□□□□ -1.96
SNRNP200O75643 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.79□□□□□ -1.96
SNRNP200O75643 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNRNP200O75643 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SNRNP200O75643 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SNRNP200O75643 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SNRNP200O75643 TXNP1-201ENST00000441872 371 ntBASIC2.79□□□□□ -1.96
SNRNP200O75643 AC090525.1-201ENST00000479116 478 ntBASIC2.79□□□□□ -1.96
SNRNP200O75643 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SNRNP200O75643 RNU1-103P-201ENST00000516502 125 ntBASIC2.79□□□□□ -1.96
SNRNP200O75643 AC109329.2-201ENST00000519658 482 ntBASIC2.79□□□□□ -1.96
SNRNP200O75643 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.79□□□□□ -1.96
SNRNP200O75643 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.79□□□□□ -1.96
SNRNP200O75643 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.79□□□□□ -1.96
SNRNP200O75643 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.79□□□□□ -1.96
SNRNP200O75643 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.79□□□□□ -1.96
SNRNP200O75643 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNRNP200O75643 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNRNP200O75643 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
SNRNP200O75643 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.79□□□□□ -1.96
SNRNP200O75643 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.78□□□□□ -1.96
SNRNP200O75643 AC092013.1-201ENST00000438795 332 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC2.78□□□□□ -1.96
SNRNP200O75643 HMGB3P8-201ENST00000449709 577 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.78□□□□□ -1.96
SNRNP200O75643 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SNRNP200O75643 AC084757.1-201ENST00000559987 490 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.78□□□□□ -1.96
SNRNP200O75643 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.78□□□□□ -1.96
SNRNP200O75643 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.78□□□□□ -1.96
SNRNP200O75643 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.78□□□□□ -1.96
SNRNP200O75643 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.78□□□□□ -1.96
SNRNP200O75643 GABRG2-229ENST00000641017 3628 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.78□□□□□ -1.96
SNRNP200O75643 ASNSP3-201ENST00000451989 1306 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNRNP200O75643 AC107081.3-201ENST00000612715 2034 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
SNRNP200O75643 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SNRNP200O75643 AC093831.2-201ENST00000624393 3427 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNRNP200O75643 SNORA62.2-201ENST00000364672 152 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 AL024507.1-201ENST00000412741 274 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 HMGB3P23-201ENST00000414981 585 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.78□□□□□ -1.96
SNRNP200O75643 HSFY1P1-201ENST00000423928 1178 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 AC096576.1-201ENST00000489014 359 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.78□□□□□ -1.96
SNRNP200O75643 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.78□□□□□ -1.96
SNRNP200O75643 AC119751.5-201ENST00000514077 770 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 AL137843.1-201ENST00000605078 385 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 AC007619.2-201ENST00000605743 379 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 AL513477.2-201ENST00000607858 568 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.78□□□□□ -1.96
SNRNP200O75643 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNRNP200O75643 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNRNP200O75643 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SNRNP200O75643 ZNF807-201ENST00000328088 1707 ntBASIC2.78□□□□□ -1.97
SNRNP200O75643 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SNRNP200O75643 RIOK3P1-201ENST00000418778 1528 ntBASIC2.77□□□□□ -1.97
SNRNP200O75643 AC025125.1-201ENST00000624743 1922 ntBASIC2.77□□□□□ -1.97
SNRNP200O75643 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
SNRNP200O75643 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SNRNP200O75643 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNRNP200O75643 MIR23A-201ENST00000385245 73 ntBASIC2.77□□□□□ -1.97
SNRNP200O75643 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNRNP200O75643 RN7SKP58-201ENST00000411010 305 ntBASIC2.77□□□□□ -1.97
SNRNP200O75643 RNA5SP184-201ENST00000411071 108 ntBASIC2.77□□□□□ -1.97
SNRNP200O75643 RPL23AP4-201ENST00000427757 463 ntBASIC2.77□□□□□ -1.97
SNRNP200O75643 ARL5AP4-201ENST00000430731 512 ntBASIC2.77□□□□□ -1.97
SNRNP200O75643 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.77□□□□□ -1.97
SNRNP200O75643 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.77□□□□□ -1.97
SNRNP200O75643 SNRPGP5-201ENST00000456003 220 ntBASIC2.77□□□□□ -1.97
SNRNP200O75643 RN7SL75P-201ENST00000461926 281 ntBASIC2.77□□□□□ -1.97
SNRNP200O75643 RPL23AP62-201ENST00000463396 453 ntBASIC2.77□□□□□ -1.97
SNRNP200O75643 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.77□□□□□ -1.97
SNRNP200O75643 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.77□□□□□ -1.97
SNRNP200O75643 AC093014.1-201ENST00000548926 724 ntBASIC2.77□□□□□ -1.97
SNRNP200O75643 AC123786.2-201ENST00000603459 275 ntBASIC2.77□□□□□ -1.97
SNRNP200O75643 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.77□□□□□ -1.97
SNRNP200O75643 AL355493.4-201ENST00000618530 292 ntBASIC2.77□□□□□ -1.97
SNRNP200O75643 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.77□□□□□ -1.97
SNRNP200O75643 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms