Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RNU6-347P-201ENST00000516658 105 ntBASIC4.26□□□□□ -1.73
LDB2O43679 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.26□□□□□ -1.73
LDB2O43679 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.26□□□□□ -1.73
LDB2O43679 AC007954.1-201ENST00000554198 494 ntBASIC4.26□□□□□ -1.73
LDB2O43679 CYP4A43P-201ENST00000568156 121 ntBASIC4.26□□□□□ -1.73
LDB2O43679 AC136624.4-201ENST00000573044 370 ntBASIC4.26□□□□□ -1.73
LDB2O43679 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.26□□□□□ -1.73
LDB2O43679 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.26□□□□□ -1.73
LDB2O43679 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LDB2O43679 ELOCP34-201ENST00000604436 327 ntBASIC4.26□□□□□ -1.73
LDB2O43679 ARF4P1-201ENST00000605447 541 ntBASIC4.26□□□□□ -1.73
LDB2O43679 MIR432-201ENST00000606207 94 ntBASIC4.26□□□□□ -1.73
LDB2O43679 AC092653.1-201ENST00000608509 531 ntBASIC4.26□□□□□ -1.73
LDB2O43679 AC116447.1-201ENST00000613153 453 ntBASIC4.26□□□□□ -1.73
LDB2O43679 AC131238.1-201ENST00000617135 328 ntBASIC4.26□□□□□ -1.73
LDB2O43679 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.26□□□□□ -1.73
LDB2O43679 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.26□□□□□ -1.73
LDB2O43679 AC243756.2-201ENST00000618406 463 ntBASIC4.26□□□□□ -1.73
LDB2O43679 CR392039.4-201ENST00000624968 501 ntBASIC4.26□□□□□ -1.73
LDB2O43679 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LDB2O43679 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.26□□□□□ -1.73
LDB2O43679 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LDB2O43679 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LDB2O43679 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LDB2O43679 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LDB2O43679 AL353743.4-201ENST00000422653 1547 ntBASIC4.26□□□□□ -1.73
LDB2O43679 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LDB2O43679 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LDB2O43679 CR381670.1-201ENST00000624291 1693 ntBASIC4.26□□□□□ -1.73
LDB2O43679 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
LDB2O43679 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LDB2O43679 AC107982.1-201ENST00000507171 1300 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AC011477.1-204ENST00000623416 1325 ntBASIC4.25□□□□□ -1.73
LDB2O43679 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LDB2O43679 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LDB2O43679 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LDB2O43679 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LDB2O43679 RNU6-253P-201ENST00000384730 105 ntBASIC4.25□□□□□ -1.73
LDB2O43679 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LDB2O43679 AL356967.1-201ENST00000406305 431 ntBASIC4.25□□□□□ -1.73
LDB2O43679 RNA5SP36-201ENST00000410197 133 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.25□□□□□ -1.73
LDB2O43679 AC073136.2-201ENST00000417282 849 ntBASIC4.25□□□□□ -1.73
LDB2O43679 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.25□□□□□ -1.73
LDB2O43679 AC244035.1-201ENST00000430042 390 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AC096638.2-201ENST00000434965 711 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.25□□□□□ -1.73
LDB2O43679 MTCO2P16-201ENST00000436962 677 ntBASIC4.25□□□□□ -1.73
LDB2O43679 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.25□□□□□ -1.73
LDB2O43679 ATP5C1P1-201ENST00000441945 895 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.25□□□□□ -1.73
LDB2O43679 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.25□□□□□ -1.73
LDB2O43679 MTCO3P11-201ENST00000455103 774 ntBASIC4.25□□□□□ -1.73
LDB2O43679 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
LDB2O43679 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LDB2O43679 AC104689.1-201ENST00000473356 768 ntBASIC4.25□□□□□ -1.73
LDB2O43679 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.25□□□□□ -1.73
LDB2O43679 NCOR1P1-202ENST00000486162 291 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.25□□□□□ -1.73
LDB2O43679 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.25□□□□□ -1.73
LDB2O43679 MTCYBP37-201ENST00000510642 1133 ntBASIC4.25□□□□□ -1.73
LDB2O43679 HMGB3P13-201ENST00000511263 607 ntBASIC4.25□□□□□ -1.73
LDB2O43679 MTCO1P30-201ENST00000515244 580 ntBASIC4.25□□□□□ -1.73
LDB2O43679 RNA5SP519-201ENST00000516480 119 ntBASIC4.25□□□□□ -1.73
LDB2O43679 RNA5SP360-201ENST00000516555 118 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.25□□□□□ -1.73
LDB2O43679 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.25□□□□□ -1.73
LDB2O43679 AL121766.1-201ENST00000547436 487 ntBASIC4.25□□□□□ -1.73
LDB2O43679 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.25□□□□□ -1.73
LDB2O43679 AC093519.1-201ENST00000566109 298 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AC138915.2-201ENST00000569776 97 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AC005951.1-201ENST00000576706 485 ntBASIC4.25□□□□□ -1.73
LDB2O43679 RN7SL176P-201ENST00000580352 264 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.25□□□□□ -1.73
LDB2O43679 AF131215.7-201ENST00000602443 707 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AC064872.1-201ENST00000604823 1072 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.25□□□□□ -1.73
LDB2O43679 AC090425.2-201ENST00000608818 501 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AC064801.1-201ENST00000612025 407 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AC073114.1-201ENST00000612027 490 ntBASIC4.25□□□□□ -1.73
LDB2O43679 FAM27D1-201ENST00000612308 341 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AC008083.4-201ENST00000615076 444 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.25□□□□□ -1.73
LDB2O43679 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
LDB2O43679 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.25□□□□□ -1.73
LDB2O43679 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LDB2O43679 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LDB2O43679 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
LDB2O43679 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.25□□□□□ -1.73
LDB2O43679 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.25□□□□□ -1.73
LDB2O43679 AC009229.4-201ENST00000623854 1947 ntBASIC4.25□□□□□ -1.73
LDB2O43679 CDR1-202ENST00000625883 1485 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.24□□□□□ -1.73
LDB2O43679 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LDB2O43679 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LDB2O43679 AC011155.1-201ENST00000316512 456 ntBASIC4.24□□□□□ -1.73
LDB2O43679 SNORA4.1-201ENST00000364263 144 ntBASIC4.24□□□□□ -1.73
LDB2O43679 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LDB2O43679 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.24□□□□□ -1.73
LDB2O43679 AC068533.2-201ENST00000411872 306 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms