Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.37□□□□□ -1.55
CUX2O14529 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CUX2O14529 AC099506.2-201ENST00000623074 221 ntBASIC5.37□□□□□ -1.55
CUX2O14529 AC092184.1-201ENST00000625042 715 ntBASIC5.37□□□□□ -1.55
CUX2O14529 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC5.37□□□□□ -1.55
CUX2O14529 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.37□□□□□ -1.55
CUX2O14529 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC5.37□□□□□ -1.55
CUX2O14529 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CUX2O14529 BCLAF1P1-201ENST00000505813 2752 ntBASIC5.37□□□□□ -1.55
CUX2O14529 AC005332.5-201ENST00000591222 2919 ntBASIC5.37□□□□□ -1.55
CUX2O14529 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CUX2O14529 SNORA18.3-201ENST00000384122 132 ntBASIC5.36□□□□□ -1.55
CUX2O14529 AC010307.1-201ENST00000467206 836 ntBASIC5.36□□□□□ -1.55
CUX2O14529 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CUX2O14529 AC087312.1-201ENST00000471411 480 ntBASIC5.36□□□□□ -1.55
CUX2O14529 AP000926.3-201ENST00000497201 299 ntBASIC5.36□□□□□ -1.55
CUX2O14529 AC114967.1-201ENST00000504890 259 ntBASIC5.36□□□□□ -1.55
CUX2O14529 AC113430.1-201ENST00000506872 718 ntBASIC5.36□□□□□ -1.55
CUX2O14529 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.36□□□□□ -1.55
CUX2O14529 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.36□□□□□ -1.55
CUX2O14529 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.36□□□□□ -1.55
CUX2O14529 SNORD53-201ENST00000579969 78 ntBASIC5.36□□□□□ -1.55
CUX2O14529 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.36□□□□□ -1.55
CUX2O14529 AL034351.1-201ENST00000605288 668 ntBASIC5.36□□□□□ -1.55
CUX2O14529 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.36□□□□□ -1.55
CUX2O14529 NF1P10-201ENST00000613227 742 ntBASIC5.36□□□□□ -1.55
CUX2O14529 ASNSP1-201ENST00000518311 1939 ntBASIC5.36□□□□□ -1.55
CUX2O14529 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.36□□□□□ -1.55
CUX2O14529 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CUX2O14529 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CUX2O14529 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CUX2O14529 MRPL50P2-201ENST00000416821 482 ntBASIC5.35□□□□□ -1.55
CUX2O14529 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.35□□□□□ -1.55
CUX2O14529 NARSP2-201ENST00000518524 679 ntBASIC5.35□□□□□ -1.55
CUX2O14529 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.35□□□□□ -1.55
CUX2O14529 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CUX2O14529 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.35□□□□□ -1.55
CUX2O14529 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.35□□□□□ -1.55
CUX2O14529 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CUX2O14529 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CUX2O14529 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CUX2O14529 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.35□□□□□ -1.55
CUX2O14529 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CUX2O14529 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CUX2O14529 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CUX2O14529 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CUX2O14529 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC5.35□□□□□ -1.55
CUX2O14529 AF117829.1-206ENST00000621883 3802 ntBASIC5.34□□□□□ -1.55
CUX2O14529 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CUX2O14529 SYT14P1-202ENST00000600441 1448 ntBASIC5.34□□□□□ -1.55
CUX2O14529 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC5.34□□□□□ -1.55
CUX2O14529 AC000123.3-201ENST00000624029 4975 ntBASIC5.34□□□□□ -1.55
CUX2O14529 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.34□□□□□ -1.55
CUX2O14529 AL121877.1-201ENST00000453704 622 ntBASIC5.34□□□□□ -1.55
CUX2O14529 SNORD109B-201ENST00000458961 67 ntBASIC5.34□□□□□ -1.55
CUX2O14529 SNORD109A-201ENST00000459128 67 ntBASIC5.34□□□□□ -1.55
CUX2O14529 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.34□□□□□ -1.55
CUX2O14529 BNIP3P38-201ENST00000601117 544 ntBASIC5.34□□□□□ -1.55
CUX2O14529 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CUX2O14529 AC099063.3-201ENST00000642066 185 ntBASIC5.34□□□□□ -1.55
CUX2O14529 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CUX2O14529 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CUX2O14529 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC5.34□□□□□ -1.56
CUX2O14529 CUL4AP1-201ENST00000514750 1863 ntBASIC5.34□□□□□ -1.56
CUX2O14529 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.34□□□□□ -1.56
CUX2O14529 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CUX2O14529 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.33□□□□□ -1.56
CUX2O14529 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.33□□□□□ -1.56
CUX2O14529 RPL23AP82-202ENST00000427528 469 ntBASIC5.33□□□□□ -1.56
CUX2O14529 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.33□□□□□ -1.56
CUX2O14529 MTCO3P16-201ENST00000454456 754 ntBASIC5.33□□□□□ -1.56
CUX2O14529 CENPBD1P1-201ENST00000464061 469 ntBASIC5.33□□□□□ -1.56
CUX2O14529 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CUX2O14529 RN7SKP116-201ENST00000516902 319 ntBASIC5.33□□□□□ -1.56
CUX2O14529 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CUX2O14529 AC079600.2-201ENST00000550076 130 ntBASIC5.33□□□□□ -1.56
CUX2O14529 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.33□□□□□ -1.56
CUX2O14529 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.33□□□□□ -1.56
CUX2O14529 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.33□□□□□ -1.56
CUX2O14529 AC099489.2-201ENST00000574976 260 ntBASIC5.33□□□□□ -1.56
CUX2O14529 uc_338.25-201ENST00000613756 156 ntBASIC5.33□□□□□ -1.56
CUX2O14529 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.33□□□□□ -1.56
CUX2O14529 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CUX2O14529 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.33□□□□□ -1.56
CUX2O14529 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CUX2O14529 AC091564.4-201ENST00000533934 2194 ntBASIC5.33□□□□□ -1.56
CUX2O14529 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CUX2O14529 Y_RNA.508-201ENST00000384502 114 ntBASIC5.32□□□□□ -1.56
CUX2O14529 AC126124.2-201ENST00000413542 321 ntBASIC5.32□□□□□ -1.56
CUX2O14529 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.32□□□□□ -1.56
CUX2O14529 FTLP19-201ENST00000433300 394 ntBASIC5.32□□□□□ -1.56
CUX2O14529 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.32□□□□□ -1.56
CUX2O14529 AC021205.2-201ENST00000480069 347 ntBASIC5.32□□□□□ -1.56
CUX2O14529 RPL36AP21-201ENST00000490372 323 ntBASIC5.32□□□□□ -1.56
CUX2O14529 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.32□□□□□ -1.56
CUX2O14529 AC106785.3-201ENST00000564064 847 ntBASIC5.32□□□□□ -1.56
CUX2O14529 AC018552.3-201ENST00000567416 561 ntBASIC5.32□□□□□ -1.56
CUX2O14529 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.32□□□□□ -1.56
CUX2O14529 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CUX2O14529 MTCO1P22-201ENST00000604619 1360 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms