Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX1O00570 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX1O00570 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX1O00570 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX1O00570 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX1O00570 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX1O00570 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SOX1O00570 MIR1-2-201ENST00000384961 85 ntBASIC5.88□□□□□ -1.47
SOX1O00570 SNORA57.1-201ENST00000391227 145 ntBASIC5.88□□□□□ -1.47
SOX1O00570 AL591848.1-201ENST00000413092 322 ntBASIC5.88□□□□□ -1.47
SOX1O00570 CHEK2P3-201ENST00000416118 248 ntBASIC5.88□□□□□ -1.47
SOX1O00570 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.88□□□□□ -1.47
SOX1O00570 AL451062.2-201ENST00000427515 271 ntBASIC5.88□□□□□ -1.47
SOX1O00570 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.88□□□□□ -1.47
SOX1O00570 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.88□□□□□ -1.47
SOX1O00570 RPL23AP30-201ENST00000432419 501 ntBASIC5.88□□□□□ -1.47
SOX1O00570 AL731534.1-201ENST00000434711 269 ntBASIC5.88□□□□□ -1.47
SOX1O00570 AL451136.1-201ENST00000435399 325 ntBASIC5.88□□□□□ -1.47
SOX1O00570 RPL23AP74-201ENST00000437246 471 ntBASIC5.88□□□□□ -1.47
SOX1O00570 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.88□□□□□ -1.47
SOX1O00570 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.88□□□□□ -1.47
SOX1O00570 AP1S2P1-201ENST00000457344 379 ntBASIC5.88□□□□□ -1.47
SOX1O00570 AC007547.1-201ENST00000462177 490 ntBASIC5.88□□□□□ -1.47
SOX1O00570 RPS4XP20-201ENST00000505751 772 ntBASIC5.88□□□□□ -1.47
SOX1O00570 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.88□□□□□ -1.47
SOX1O00570 Y_RNA.711-201ENST00000516993 102 ntBASIC5.88□□□□□ -1.47
SOX1O00570 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.88□□□□□ -1.47
SOX1O00570 AC107934.1-201ENST00000522215 217 ntBASIC5.88□□□□□ -1.47
SOX1O00570 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX1O00570 AP002373.2-201ENST00000541631 1060 ntBASIC5.88□□□□□ -1.47
SOX1O00570 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.88□□□□□ -1.47
SOX1O00570 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.88□□□□□ -1.47
SOX1O00570 OR4T1P-201ENST00000554933 911 ntBASIC5.88□□□□□ -1.47
SOX1O00570 AC026464.5-201ENST00000562497 722 ntBASIC5.88□□□□□ -1.47
SOX1O00570 AC098848.2-201ENST00000588023 330 ntBASIC5.88□□□□□ -1.47
SOX1O00570 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SOX1O00570 7SK.10-201ENST00000621414 298 ntBASIC5.88□□□□□ -1.47
SOX1O00570 AC067931.1-201ENST00000624190 671 ntBASIC5.88□□□□□ -1.47
SOX1O00570 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX1O00570 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.88□□□□□ -1.47
SOX1O00570 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX1O00570 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX1O00570 TRIM51GP-201ENST00000534741 1350 ntBASIC5.88□□□□□ -1.47
SOX1O00570 VPS35P1-201ENST00000563400 1518 ntBASIC5.88□□□□□ -1.47
SOX1O00570 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX1O00570 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX1O00570 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX1O00570 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX1O00570 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SOX1O00570 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SOX1O00570 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 AC073343.1-201ENST00000328239 651 ntBASIC5.87□□□□□ -1.47
SOX1O00570 Y_RNA.146-201ENST00000363549 102 ntBASIC5.87□□□□□ -1.47
SOX1O00570 RNU6-996P-201ENST00000365438 107 ntBASIC5.87□□□□□ -1.47
SOX1O00570 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.87□□□□□ -1.47
SOX1O00570 MIR130A-201ENST00000385274 89 ntBASIC5.87□□□□□ -1.47
SOX1O00570 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.87□□□□□ -1.47
SOX1O00570 AL133384.1-201ENST00000412744 351 ntBASIC5.87□□□□□ -1.47
SOX1O00570 AL451054.2-201ENST00000420896 202 ntBASIC5.87□□□□□ -1.47
SOX1O00570 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.87□□□□□ -1.47
SOX1O00570 AC108059.2-201ENST00000434626 151 ntBASIC5.87□□□□□ -1.47
SOX1O00570 AL356276.2-201ENST00000435919 558 ntBASIC5.87□□□□□ -1.47
SOX1O00570 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.87□□□□□ -1.47
SOX1O00570 AL022237.1-201ENST00000446663 358 ntBASIC5.87□□□□□ -1.47
SOX1O00570 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.87□□□□□ -1.47
SOX1O00570 HMGN2P26-201ENST00000463169 339 ntBASIC5.87□□□□□ -1.47
SOX1O00570 PPIAP21-201ENST00000464473 501 ntBASIC5.87□□□□□ -1.47
SOX1O00570 ST13P14-201ENST00000474095 734 ntBASIC5.87□□□□□ -1.47
SOX1O00570 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.87□□□□□ -1.47
SOX1O00570 AC068522.1-201ENST00000482895 345 ntBASIC5.87□□□□□ -1.47
SOX1O00570 AC020890.1-201ENST00000491837 504 ntBASIC5.87□□□□□ -1.47
SOX1O00570 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.87□□□□□ -1.47
SOX1O00570 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.87□□□□□ -1.47
SOX1O00570 RNU6-1220P-201ENST00000517126 108 ntBASIC5.87□□□□□ -1.47
SOX1O00570 SOD1P3-201ENST00000518682 454 ntBASIC5.87□□□□□ -1.47
SOX1O00570 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.87□□□□□ -1.47
SOX1O00570 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.87□□□□□ -1.47
SOX1O00570 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
SOX1O00570 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.87□□□□□ -1.47
SOX1O00570 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.87□□□□□ -1.47
SOX1O00570 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.87□□□□□ -1.47
SOX1O00570 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.87□□□□□ -1.47
SOX1O00570 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SOX1O00570 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.87□□□□□ -1.47
SOX1O00570 AC006006.1-201ENST00000603082 144 ntBASIC5.87□□□□□ -1.47
SOX1O00570 AL022345.1-201ENST00000607292 135 ntBASIC5.87□□□□□ -1.47
SOX1O00570 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 AC130324.3-201ENST00000614165 542 ntBASIC5.87□□□□□ -1.47
SOX1O00570 AL132822.1-201ENST00000617063 513 ntBASIC5.87□□□□□ -1.47
SOX1O00570 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 AC040168.1-201ENST00000623594 991 ntBASIC5.87□□□□□ -1.47
SOX1O00570 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 KPNA2P2-201ENST00000419546 1489 ntBASIC5.87□□□□□ -1.47
SOX1O00570 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms