Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SLC28A1O00337 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC28A1O00337 ZNF37BP-203ENST00000452306 1352 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SLC28A1O00337 MIR217-201ENST00000384817 110 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 MT-TC-201ENST00000387405 66 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 AL023807.1-201ENST00000407932 359 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC28A1O00337 OR8G2P-201ENST00000412796 908 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 AL136133.1-201ENST00000413694 376 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 MTND4P3-201ENST00000417829 541 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 TCEA1P2-201ENST00000420496 906 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC28A1O00337 HIGD1AP12-201ENST00000427832 281 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 AL365396.1-201ENST00000430854 671 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 BMS1P19-201ENST00000433925 393 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC28A1O00337 AC092393.1-201ENST00000439625 742 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC28A1O00337 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.69□□□□□ -1.82
SLC28A1O00337 AC104073.1-201ENST00000451988 151 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 CAB39P1-201ENST00000502277 460 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 MTND3P3-201ENST00000505004 126 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 RN7SKP83-201ENST00000516512 178 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC28A1O00337 AC010376.1-201ENST00000522101 334 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC28A1O00337 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC28A1O00337 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC28A1O00337 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SLC28A1O00337 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC28A1O00337 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC28A1O00337 AC107954.1-201ENST00000565906 727 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.69□□□□□ -1.82
SLC28A1O00337 AC006270.2-201ENST00000578523 652 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 KPNA2P3-201ENST00000584190 848 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 AC113368.1-201ENST00000603736 382 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 AC025588.3-201ENST00000604182 274 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.69□□□□□ -1.82
SLC28A1O00337 AC013437.2-201ENST00000639587 677 ntBASIC3.69□□□□□ -1.82
SLC28A1O00337 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC28A1O00337 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC28A1O00337 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SLC28A1O00337 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SLC28A1O00337 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SLC28A1O00337 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
SLC28A1O00337 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SLC28A1O00337 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SLC28A1O00337 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC28A1O00337 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SLC28A1O00337 OFD1P18Y-201ENST00000420889 959 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 RPS6P14-201ENST00000425165 719 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 C1DP1-201ENST00000426049 402 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC28A1O00337 Z93242.1-201ENST00000427102 353 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 AC005345.1-201ENST00000431868 217 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC28A1O00337 MTCO3P16-201ENST00000454456 754 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 TRBV26-201ENST00000456572 344 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 NIPA2P2-201ENST00000496376 1083 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 BOLA3P3-201ENST00000505182 232 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
SLC28A1O00337 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC28A1O00337 RNA5SP164-201ENST00000516533 110 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 RN7SKP116-201ENST00000516902 319 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.68□□□□□ -1.82
SLC28A1O00337 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.68□□□□□ -1.82
SLC28A1O00337 AC118942.1-201ENST00000529674 1035 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 DEFB130C-202ENST00000530001 230 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 LRRC6P1-201ENST00000532188 885 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.68□□□□□ -1.82
SLC28A1O00337 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC28A1O00337 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC28A1O00337 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.68□□□□□ -1.82
SLC28A1O00337 AL445435.1-201ENST00000604232 665 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 AC073387.2-201ENST00000604797 784 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 IGHV3-29-201ENST00000604817 344 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 AL034351.1-201ENST00000605288 668 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC28A1O00337 AF129408.1-201ENST00000608767 431 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 AL354976.1-201ENST00000613843 387 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 AC073530.2-201ENST00000623987 261 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 AC112484.5-201ENST00000624189 228 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 AC004808.1-201ENST00000627671 721 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SLC28A1O00337 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SLC28A1O00337 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SLC28A1O00337 RLIMP1-201ENST00000339626 1680 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SLC28A1O00337 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 MTND4P9-201ENST00000507819 1346 ntBASIC3.68□□□□□ -1.82
SLC28A1O00337 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
SLC28A1O00337 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC28A1O00337 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC28A1O00337 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SLC28A1O00337 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.67□□□□□ -1.82
SLC28A1O00337 AC006504.1-201ENST00000562493 3666 ntBASIC3.67□□□□□ -1.82
SLC28A1O00337 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms