Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC188H7C350 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC188H7C350 MIR4697-201ENST00000582977 78 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 AC234771.5-201ENST00000600161 514 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC188H7C350 AC009237.15-201ENST00000610252 501 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 MIR378J-201ENST00000611988 109 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 MIR7703-201ENST00000620784 77 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 OR1S1-201ENST00000624470 978 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 AC010608.2-201ENST00000624830 470 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC188H7C350 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC188H7C350 MFSD8-216ENST00000641147 4009 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC188H7C350 AC008725.1-201ENST00000605123 2263 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC188H7C350 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC188H7C350 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC188H7C350 ZNF734P-201ENST00000419494 1534 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC188H7C350 RNA5SP505-201ENST00000364748 108 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC188H7C350 AL391417.1-201ENST00000404100 426 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC188H7C350 AL356967.1-201ENST00000406305 431 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 VN1R51P-201ENST00000411675 945 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 RPL31P2-201ENST00000413849 377 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 OR4K6P-201ENST00000416478 897 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 AC127526.1-201ENST00000417526 366 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 RPS27AP7-201ENST00000422792 455 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 GTF2IP23-201ENST00000423746 351 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 AC002075.2-201ENST00000425207 252 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC188H7C350 CNOT7P1-201ENST00000429006 852 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC188H7C350 AC005345.1-201ENST00000431868 217 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 RPS6P12-201ENST00000432491 726 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC188H7C350 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC188H7C350 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC188H7C350 AC093155.1-201ENST00000440164 826 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC188H7C350 AL358794.1-201ENST00000445689 381 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 RPS20P32-201ENST00000456044 356 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 AL672167.3-201ENST00000465951 960 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC188H7C350 RPL21P131-201ENST00000497298 483 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC188H7C350 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC188H7C350 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC188H7C350 Vault.1-201ENST00000516474 102 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC188H7C350 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC188H7C350 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC188H7C350 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC188H7C350 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC188H7C350 AC113368.1-201ENST00000603736 382 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 AC110741.2-201ENST00000605278 268 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 HMGN2P28-201ENST00000606102 262 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 AC144521.1-201ENST00000607148 956 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC188H7C350 AC104763.3-201ENST00000613765 618 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 U7.8-201ENST00000619968 63 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 MIR8059-201ENST00000620427 81 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 AL157770.1-201ENST00000623049 439 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 OR6C71P-202ENST00000641886 1107 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 AP002001.2-201ENST00000529025 1469 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 AC117529.2-201ENST00000512159 2068 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC188H7C350 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC188H7C350 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC188H7C350 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CCDC188H7C350 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC188H7C350 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC188H7C350 MTCO1P14-201ENST00000441695 1559 ntBASIC4.02□□□□□ -1.77
CCDC188H7C350 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC188H7C350 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC188H7C350 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC188H7C350 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC188H7C350 RN7SKP44-201ENST00000363602 316 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 RNA5SP509-201ENST00000364577 119 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 RNU6-398P-201ENST00000384143 109 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 Y_RNA.493-201ENST00000384422 102 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 MIR217-201ENST00000384817 110 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 RPL23AP47-201ENST00000408017 460 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 RNU2-28P-201ENST00000410457 189 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 RN7SKP33-201ENST00000410942 340 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 Z75741.2-201ENST00000417272 1167 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC188H7C350 AL035410.1-201ENST00000427409 427 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC188H7C350 RPL23AP16-201ENST00000441715 421 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC188H7C350 AL034418.1-201ENST00000448675 860 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC188H7C350 AC079776.3-201ENST00000450665 370 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 TRBV26-201ENST00000456572 344 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 MTCO3P2-201ENST00000457365 171 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms