Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 MIR4716-201ENST00000579628 84 ntBASIC3.8□□□□□ -1.8
NEDD8-MDP1E9PL57 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.8□□□□□ -1.8
NEDD8-MDP1E9PL57 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.8□□□□□ -1.8
NEDD8-MDP1E9PL57 AC110741.2-201ENST00000605278 268 ntBASIC3.8□□□□□ -1.8
NEDD8-MDP1E9PL57 RNU6-1192P-201ENST00000612197 107 ntBASIC3.8□□□□□ -1.8
NEDD8-MDP1E9PL57 RNU6-489P-201ENST00000618289 107 ntBASIC3.8□□□□□ -1.8
NEDD8-MDP1E9PL57 AC084824.4-201ENST00000620106 731 ntBASIC3.8□□□□□ -1.8
NEDD8-MDP1E9PL57 AC114546.3-201ENST00000623582 1734 ntBASIC3.8□□□□□ -1.8
NEDD8-MDP1E9PL57 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NEDD8-MDP1E9PL57 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
NEDD8-MDP1E9PL57 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.8□□□□□ -1.8
NEDD8-MDP1E9PL57 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NEDD8-MDP1E9PL57 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.8□□□□□ -1.8
NEDD8-MDP1E9PL57 LINC00561-201ENST00000565815 2738 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC025263.3-201ENST00000622965 1396 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 RNU6-549P-201ENST00000384433 107 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 RNU6-925P-201ENST00000384629 104 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 TAF13P2-201ENST00000416876 286 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 USP9YP21-201ENST00000420603 432 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AL009174.1-201ENST00000426577 416 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC092634.2-201ENST00000428146 1010 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC002542.1-201ENST00000440683 193 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC006480.1-201ENST00000449887 378 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC015724.1-201ENST00000478577 156 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 TRBV12-2-201ENST00000489763 344 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 CAB39P1-201ENST00000502277 460 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC119751.1-201ENST00000513357 765 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 IGKV2D-23-201ENST00000518179 286 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 IGJP1-201ENST00000522682 475 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC008011.1-201ENST00000545989 227 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC091515.1-201ENST00000548110 679 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC006960.3-201ENST00000561845 705 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 VN1R87P-201ENST00000596706 487 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC020914.4-201ENST00000597690 277 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC091057.3-201ENST00000602684 733 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC010591.1-201ENST00000603941 649 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AL163642.2-201ENST00000604722 1019 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC093673.2-201ENST00000609674 331 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC015967.1-201ENST00000619893 476 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AL357559.1-201ENST00000622228 274 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AC010608.3-201ENST00000625048 527 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AP000553.6-201ENST00000641242 118 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 MTCO1P12-201ENST00000414273 1543 ntBASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEDD8-MDP1E9PL57 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC046144.1-201ENST00000478559 1853 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 FAM35DP-201ENST00000323387 2712 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 RNU6-236P-201ENST00000363886 106 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 OR52E6-202ENST00000379946 954 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 MIR525-201ENST00000384978 85 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC027644.1-201ENST00000419595 298 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 CYCSP43-201ENST00000438233 310 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 HMGB1P16-201ENST00000447155 540 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC096992.1-201ENST00000459808 709 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC126121.1-201ENST00000482313 553 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 RPS27P23-201ENST00000487608 251 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC005726.1-201ENST00000494679 427 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC023050.1-201ENST00000498198 304 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 FTH1P24-201ENST00000503502 462 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC110768.1-201ENST00000509222 400 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 SNORD116-26-201ENST00000516006 96 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms