Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL713922.1-201ENST00000416477 747 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 PUDPP2-201ENST00000431423 643 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 AC092162.1-201ENST00000432828 434 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 PHB2P1-201ENST00000434943 890 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 RNU7-138P-201ENST00000459479 64 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 RN7SL492P-201ENST00000460700 295 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 RPL21P103-201ENST00000479921 488 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 RN7SL776P-201ENST00000493390 268 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 AC010409.2-201ENST00000505780 478 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 IGHVII-62-1-201ENST00000519283 235 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 AC007068.2-201ENST00000543168 395 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 AC011193.2-201ENST00000582638 367 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 AC008962.1-201ENST00000605729 304 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 MAPK10-365ENST00000641902 3825 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 AC139426.3-201ENST00000605648 2059 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 AP002800.1-201ENST00000624982 2225 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 LPAL2-203ENST00000454031 2498 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 DLEU2L-201ENST00000371086 3555 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 Z97989.1-201ENST00000531702 2421 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 OR4G2P-202ENST00000641004 1759 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AC027088.4-201ENST00000611559 1947 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 RNU6-1325P-201ENST00000364905 105 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 RNU6-918P-201ENST00000391219 106 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 PRRC2CP1-201ENST00000404428 159 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 RNA5SP107-201ENST00000411358 122 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 RNA5SP111-201ENST00000411386 101 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 RPL24P2-201ENST00000421023 475 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AL359633.1-201ENST00000421403 310 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AL355032.1-201ENST00000472981 438 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 RN7SL187P-201ENST00000495587 303 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 RPS17P5-201ENST00000498293 408 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 SNORD116-28-201ENST00000516123 91 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 RNU6-798P-201ENST00000516912 103 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 OR10G5P-201ENST00000532733 358 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AC010186.2-204ENST00000537668 439 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AC125612.1-201ENST00000547580 377 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AC007956.1-201ENST00000555623 542 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AC023206.1-201ENST00000605824 298 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 AL022323.4-201ENST00000623980 13120 ntBASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VPS9D1Q9Y2B5 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms