Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CNTN3Q9P232 MTCO1P9-201ENST00000505577 1534 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 RNU6-996P-201ENST00000365438 107 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 RNU1-136P-201ENST00000384181 164 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 AC016769.3-201ENST00000396562 315 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 AL591416.1-201ENST00000404015 867 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 RNF10P1-201ENST00000418589 369 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 AC096632.1-201ENST00000427395 310 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 RPL23AP30-201ENST00000432419 501 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 OR6D1P-201ENST00000436165 939 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 RPL32P9-201ENST00000487963 407 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CNTN3Q9P232 SUB1P1-201ENST00000524415 382 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 PSMA2P1-201ENST00000526365 646 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 AC090022.1-201ENST00000546569 311 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 MIR3171-201ENST00000584270 74 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 HSPE1P14-201ENST00000605812 302 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNTN3Q9P232 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CNTN3Q9P232 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNTN3Q9P232 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNTN3Q9P232 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNTN3Q9P232 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNTN3Q9P232 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNTN3Q9P232 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNTN3Q9P232 XPOTP1-201ENST00000443317 2398 ntBASIC6.06□□□□□ -1.44
CNTN3Q9P232 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CNTN3Q9P232 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNTN3Q9P232 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNTN3Q9P232 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNTN3Q9P232 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNTN3Q9P232 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 RNU6-28P-201ENST00000362378 107 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 Y_RNA.216-201ENST00000364205 93 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 SNORA63C-201ENST00000364578 129 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 RN7SKP6-201ENST00000364795 319 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 SNORA4.3-201ENST00000365564 137 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 RNU4-2-201ENST00000365668 141 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 MIR559-201ENST00000385188 96 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 RPL7P60-201ENST00000397636 735 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 DSTNP4-201ENST00000399472 474 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 AL356421.1-201ENST00000403255 413 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 AC007283.2-201ENST00000424739 197 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 AL356276.2-201ENST00000435919 558 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 SPRYD7P1-201ENST00000443861 570 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 RPS26P56-201ENST00000444468 240 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 Z80107.2-201ENST00000445127 392 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 AL596266.1-201ENST00000448132 400 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 AC100832.1-201ENST00000471945 383 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 RN7SL583P-201ENST00000475692 287 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 RN7SL809P-201ENST00000482040 297 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 AC093677.1-201ENST00000514414 678 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 RNU4-49P-201ENST00000516080 140 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 SCARNA21.2-201ENST00000516600 166 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 RN7SKP256-201ENST00000517201 314 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.05□□□□□ -1.44
CNTN3Q9P232 AL022345.1-201ENST00000607292 135 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 AL355472.4-201ENST00000610233 626 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 AL118522.2-201ENST00000616045 615 ntBASIC6.05□□□□□ -1.44
CNTN3Q9P232 AC132068.1-201ENST00000623805 459 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms