Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MTND5P28-201ENST00000438005 1594 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 AC091046.3-201ENST00000631455 1574 ntBASIC4.9□□□□□ -1.63
COL20A1Q9P218 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COL20A1Q9P218 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL20A1Q9P218 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL20A1Q9P218 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL20A1Q9P218 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL20A1Q9P218 AL450326.2-201ENST00000421913 1962 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
COL20A1Q9P218 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.89□□□□□ -1.63
COL20A1Q9P218 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL20A1Q9P218 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL20A1Q9P218 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL20A1Q9P218 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL20A1Q9P218 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COL20A1Q9P218 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL20A1Q9P218 AL021407.1-201ENST00000404531 386 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 PIGPP2-201ENST00000411569 458 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 RPS20P1-201ENST00000434853 354 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC092427.1-201ENST00000439177 601 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 RPL23AP16-201ENST00000441715 421 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC114755.5-201ENST00000447760 831 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 RNA5SP103-201ENST00000459503 118 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC072039.1-201ENST00000477611 581 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 OR4G11P-201ENST00000492842 939 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC108078.3-201ENST00000502633 489 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL20A1Q9P218 PGBD4P4-201ENST00000509673 613 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC018797.3-201ENST00000513388 1241 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC117532.1-201ENST00000514638 323 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC239860.2-201ENST00000525886 270 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.89□□□□□ -1.63
COL20A1Q9P218 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.89□□□□□ -1.63
COL20A1Q9P218 MIR4504-201ENST00000577413 92 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 MIR4512-201ENST00000583257 77 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 SNORD39.3-201ENST00000584451 71 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC090948.2-201ENST00000607363 564 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC023043.4-201ENST00000612081 449 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 FAM27D1-201ENST00000612308 341 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC011939.3-201ENST00000613686 466 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC008083.4-201ENST00000615076 444 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 SNX18P1Y-201ENST00000616231 511 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC068722.2-201ENST00000618734 544 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC008443.7-201ENST00000622195 246 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
COL20A1Q9P218 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.89□□□□□ -1.63
COL20A1Q9P218 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL20A1Q9P218 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
COL20A1Q9P218 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COL20A1Q9P218 MFSD8-242ENST00000641690 4199 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL20A1Q9P218 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL20A1Q9P218 AC083843.2-201ENST00000568248 6253 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
COL20A1Q9P218 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL20A1Q9P218 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.89□□□□□ -1.63
COL20A1Q9P218 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL20A1Q9P218 AL592182.3-201ENST00000642132 3304 ntBASIC4.89□□□□□ -1.63
COL20A1Q9P218 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL20A1Q9P218 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL20A1Q9P218 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL20A1Q9P218 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL20A1Q9P218 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL20A1Q9P218 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL20A1Q9P218 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL20A1Q9P218 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL20A1Q9P218 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL20A1Q9P218 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 SNRPEP3-201ENST00000338402 276 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 MIR372-201ENST00000362225 67 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL20A1Q9P218 RNU6-1293P-201ENST00000384077 107 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 AL450338.1-201ENST00000407987 512 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC004022.2-201ENST00000413824 193 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 CEACAMP8-201ENST00000413902 580 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 MTCYBP38-201ENST00000417160 1123 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 OR6C64P-201ENST00000419708 825 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 RPL23AP25-201ENST00000430973 463 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 RPS7P7-201ENST00000463499 571 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC087879.1-201ENST00000474343 374 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 HSPE1P23-201ENST00000509838 286 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 RNA5SP216-201ENST00000516111 123 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.88□□□□□ -1.63
COL20A1Q9P218 ZNF705CP-201ENST00000530515 889 ntBASIC4.88□□□□□ -1.63
COL20A1Q9P218 CYCSP28-201ENST00000534284 321 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms