Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 RPL31P45-201ENST00000419532 356 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 MTND4LP11-201ENST00000422184 280 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 MTCO2P5-201ENST00000422621 426 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 MRPS10P2-201ENST00000431226 381 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 RPS20P1-201ENST00000434853 354 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 HSPA8P18-201ENST00000439846 1928 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 KNOP1P3-201ENST00000446933 426 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AL354714.3-201ENST00000447284 493 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 NPM1P49-201ENST00000448027 714 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AC093392.2-201ENST00000450682 337 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 HMGB1P15-201ENST00000453854 435 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AC097484.1-201ENST00000471148 389 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 RN7SL222P-201ENST00000476452 299 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 RPS18P6-201ENST00000476880 458 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AC126182.1-201ENST00000478134 357 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 RPL9P6-201ENST00000492764 598 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AC105252.1-201ENST00000503089 286 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 RNU6-430P-201ENST00000517078 107 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AL122126.1-201ENST00000546905 1318 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AL157394.1-201ENST00000562983 1224 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AC053481.3-201ENST00000577881 843 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AC010857.1-201ENST00000606398 594 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AL513477.2-201ENST00000607858 568 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AF250324.2-201ENST00000608299 610 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 MIR6768-201ENST00000610734 72 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 AC090970.3-201ENST00000612566 866 ntBASIC4.59□□□□□ -1.67
RLIMQ9NVW2 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.59□□□□□ -1.67
RLIMQ9NVW2 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
RLIMQ9NVW2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RLIMQ9NVW2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RLIMQ9NVW2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.59□□□□□ -1.68
RLIMQ9NVW2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RLIMQ9NVW2 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.59□□□□□ -1.68
RLIMQ9NVW2 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.59□□□□□ -1.68
RLIMQ9NVW2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
RLIMQ9NVW2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 AL445437.1-201ENST00000623157 3087 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 AC095050.2-201ENST00000510748 1458 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 AC009643.2-201ENST00000603543 1448 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 SNURFL-201ENST00000309296 343 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 SNORA73.1-201ENST00000363107 205 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 RNVU1-3-201ENST00000364313 161 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 Y_RNA.296-201ENST00000364930 108 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 MIR223-201ENST00000385204 110 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 BTBD10P2-201ENST00000404779 676 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 FCF1P10-201ENST00000407590 479 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 RNU6-195P-201ENST00000411352 109 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 RPL36AP36-201ENST00000418616 301 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 PPIAP20-201ENST00000449839 135 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 RPS20P32-201ENST00000456044 356 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 RPS20P21-201ENST00000466859 343 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 AC093267.1-201ENST00000489176 961 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 SNRPCP2-201ENST00000504370 475 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 HIGD1AP14-201ENST00000507617 282 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 RNU6-718P-201ENST00000516166 105 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 RNA5SP464-201ENST00000516251 108 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 RN7SKP244-201ENST00000516513 307 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 AC107918.3-201ENST00000533272 382 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.58□□□□□ -1.68
RLIMQ9NVW2 AC006960.3-201ENST00000561845 705 ntBASIC4.58□□□□□ -1.68
RLIMQ9NVW2 AC234778.2-201ENST00000566241 354 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms