Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 FTH1P9-201ENST00000513251 355 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AL121766.1-201ENST00000547436 487 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 MIR4480-201ENST00000582492 71 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AL365400.2-201ENST00000605604 902 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AL354760.1-201ENST00000608357 643 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AL161616.1-201ENST00000611867 286 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 MIR6780A-201ENST00000615089 68 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AP001784.1-201ENST00000624107 428 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 ZNF663P-202ENST00000641770 1131 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 SAGE2P-201ENST00000420011 2126 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 RNU5E-10P-201ENST00000363506 118 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 RNU6-236P-201ENST00000363886 106 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 RNU6-224P-201ENST00000384055 107 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 RNU11-4P-201ENST00000391149 133 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 RNA5SP107-201ENST00000411358 122 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 RPS7P9-201ENST00000414704 586 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 AC093578.1-201ENST00000415219 368 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 NUP35P2-201ENST00000416748 943 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 RPS15AP40-201ENST00000419621 391 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 RPP40P1-201ENST00000426762 456 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 RPL23AP1-201ENST00000428990 471 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 MRPS18BP2-201ENST00000434310 759 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 EXOSC3P1-201ENST00000448649 500 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 OR9M1P-201ENST00000459641 921 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 AC105233.1-201ENST00000498840 781 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 SOD1P3-201ENST00000518682 454 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 LRRC6P1-201ENST00000532188 885 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 AC037471.2-201ENST00000564941 598 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 RPL12P25-202ENST00000598100 674 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 AC092653.1-201ENST00000608509 531 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 BX323046.1-201ENST00000610145 535 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 AC016597.2-201ENST00000613256 341 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 AL713922.2-201ENST00000619384 716 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 AC022960.3-201ENST00000619794 441 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 AL357559.1-201ENST00000622228 274 ntBASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
VIPAS39Q9H9C1 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 ANKRD36P1-201ENST00000344424 659 ntBASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 RPS3AP23-201ENST00000401762 784 ntBASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 AC126124.2-201ENST00000413542 321 ntBASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 MTCO2P23-201ENST00000425216 680 ntBASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 AP000907.1-201ENST00000428428 510 ntBASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 OR4F13P-201ENST00000428478 931 ntBASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 GTF2IP3-201ENST00000433887 494 ntBASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 MTCO1P53-201ENST00000441633 699 ntBASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 MTCYBP42-201ENST00000444653 1130 ntBASIC3.78□□□□□ -1.8
VIPAS39Q9H9C1 MRPL42P4-201ENST00000453267 443 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms