| SMR3A | Q99954 | AC017002.4-201 | ENST00000604721 | 1525 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | CFAP44-202 | ENST00000393845 | 7069 nt | APPRIS ALT2 TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AL049830.3-201 | ENST00000555108 | 1991 nt | TSL 1 (best) BASIC | 2.36 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC092079.1-201 | ENST00000558620 | 1985 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | LGI1-228 | ENST00000637689 | 1802 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | TTN-204 | ENST00000360870 | 18218 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC011900.1-201 | ENST00000446838 | 2999 nt | TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | SLC25A17-202 | ENST00000402844 | 2405 nt | TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | TUBD1-204 | ENST00000376094 | 1154 nt | TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AL365356.1-201 | ENST00000411512 | 736 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | RPL7P8-201 | ENST00000411964 | 730 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | RANP4-201 | ENST00000413361 | 655 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC009963.1-201 | ENST00000417265 | 157 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | Z98742.3-201 | ENST00000418637 | 326 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AL162725.2-201 | ENST00000430545 | 748 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC092598.1-201 | ENST00000431708 | 797 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AL139289.1-201 | ENST00000436713 | 731 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC007000.3-201 | ENST00000459742 | 617 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | ZIC4-AS1-201 | ENST00000462168 | 268 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | RN7SL93P-201 | ENST00000463035 | 293 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | NDUFA6-201 | ENST00000470753 | 475 nt | TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | ACTG1P13-201 | ENST00000486987 | 1043 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC069444.1-201 | ENST00000489428 | 266 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | SRI-210 | ENST00000490437 | 570 nt | TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | RNU6-548P-201 | ENST00000517083 | 115 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AP003718.1-201 | ENST00000529884 | 583 nt | TSL 4 BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AL034351.1-201 | ENST00000605288 | 668 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC006840.1-201 | ENST00000623069 | 542 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | HNRNPC-203 | ENST00000430246 | 4501 nt | APPRIS P2 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | HERC5-203 | ENST00000508159 | 2243 nt | TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | PGGT1B-203 | ENST00000419445 | 9545 nt | APPRIS P1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | CDC27-207 | ENST00000531206 | 3177 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | NOC3L-201 | ENST00000371361 | 3455 nt | APPRIS P1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AGL-205 | ENST00000370163 | 7166 nt | APPRIS P1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | ERBIN-203 | ENST00000380938 | 4701 nt | TSL 2 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | BIRC3-206 | ENST00000532808 | 4238 nt | APPRIS P1 TSL 5 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | SLCO1B7-201 | ENST00000421593 | 1923 nt | APPRIS P1 TSL 1 (best) BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | FKTN-201 | ENST00000223528 | 7364 nt | APPRIS P1 TSL 1 (best) BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | OR56A3-203 | ENST00000641160 | 4438 nt | APPRIS P1 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | OLFM3-206 | ENST00000536598 | 2801 nt | TSL 5 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC006150.1-201 | ENST00000412014 | 263 nt | TSL 5 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC024619.1-202 | ENST00000426489 | 495 nt | TSL 3 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | REG1CP-203 | ENST00000434852 | 460 nt | TSL 4 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AL360169.1-201 | ENST00000435116 | 143 nt | TSL 5 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC007099.2-201 | ENST00000444852 | 336 nt | TSL 5 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | MTND2P25-201 | ENST00000449028 | 610 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | LINC01810-201 | ENST00000450397 | 411 nt | TSL 3 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | RN7SL20P-201 | ENST00000488827 | 297 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC009446.1-202 | ENST00000521131 | 473 nt | TSL 3 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AP001978.1-201 | ENST00000526851 | 834 nt | TSL 2 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC117377.1-201 | ENST00000547633 | 1038 nt | TSL 1 (best) BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC107016.2-201 | ENST00000547968 | 190 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC009396.3-201 | ENST00000555680 | 354 nt | TSL 5 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC022809.1-201 | ENST00000579247 | 428 nt | TSL 3 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC093227.3-202 | ENST00000586606 | 704 nt | APPRIS P5 TSL 3 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC008638.3-201 | ENST00000603341 | 463 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC092608.2-201 | ENST00000624427 | 218 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | AC007218.2-201 | ENST00000636913 | 179 nt | TSL 5 BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | EMCN-202 | ENST00000305864 | 1575 nt | TSL 1 (best) BASIC | 2.34 | □□□□□ -2.03 | | |
| SMR3A | Q99954 | TIPARP-207 | ENST00000542783 | 3681 nt | APPRIS P1 TSL 1 (best) BASIC | 2.34 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | TRDN-206 | ENST00000628709 | 1661 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.34 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | ANKRD30A-201 | ENST00000361713 | 4405 nt | APPRIS P2 TSL 5 BASIC | 2.34 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | EVI5-201 | ENST00000370331 | 7403 nt | APPRIS P3 TSL 1 (best) BASIC | 2.34 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | EVI5-208 | ENST00000540033 | 7436 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.34 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | AC007496.3-201 | ENST00000624987 | 3443 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | DST-204 | ENST00000361203 | 22431 nt | APPRIS ALT2 TSL 5 BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | HEATR5B-201 | ENST00000233099 | 6905 nt | APPRIS P1 TSL 1 (best) BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | OR51L1-203 | ENST00000641819 | 7300 nt | APPRIS P1 BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | KCNJ16-203 | ENST00000392671 | 3981 nt | APPRIS P1 TSL 2 BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | ARHGAP15-202 | ENST00000409869 | 2968 nt | TSL 5 BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | C5orf42-205 | ENST00000508244 | 11062 nt | APPRIS P2 TSL 5 BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | TFPI-202 | ENST00000339091 | 1088 nt | TSL 1 (best) BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | RNA5SP289-201 | ENST00000362332 | 137 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | RNVU1-3-201 | ENST00000364313 | 161 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | SNORA9.2-201 | ENST00000365361 | 133 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | TRAV26-1-201 | ENST00000390455 | 537 nt | APPRIS P1 BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | AL138827.1-201 | ENST00000402666 | 306 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | RPS4XP7-201 | ENST00000406274 | 780 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | AC004014.1-201 | ENST00000413406 | 538 nt | TSL 4 BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | BBS9-205 | ENST00000425508 | 1252 nt | TSL 1 (best) BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | LINC00266-4P-201 | ENST00000427373 | 842 nt | TSL 3 BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | NUTM2A-AS1-209 | ENST00000447424 | 571 nt | TSL 3 BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | AC104058.1-201 | ENST00000448028 | 297 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | AC008154.1-201 | ENST00000453087 | 327 nt | TSL 3 BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | AL158069.1-201 | ENST00000454131 | 455 nt | TSL 5 BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | MTCO3P20-201 | ENST00000454926 | 688 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | OR5H5P-201 | ENST00000503164 | 928 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | CSN1S1-204 | ENST00000507772 | 895 nt | APPRIS ALT2 TSL 5 BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | AC006445.2-201 | ENST00000510061 | 472 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | AC026782.2-201 | ENST00000510845 | 636 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | IL7R-208 | ENST00000511982 | 612 nt | TSL 2 BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | RNU6-991P-201 | ENST00000516168 | 107 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | AL358913.1-201 | ENST00000554342 | 121 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | AC093524.1-201 | ENST00000564266 | 1094 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | DEFB122-202 | ENST00000569013 | 197 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | AC080078.1-201 | ENST00000603643 | 410 nt | TSL 3 BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | AC010680.4-201 | ENST00000605334 | 543 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | AC022509.4-201 | ENST00000621404 | 572 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | CPB2-202 | ENST00000439329 | 1655 nt | TSL 5 BASIC | 2.33 | □□□□□ -2.04 | | |
| SMR3A | Q99954 | KTN1-206 | ENST00000413890 | 4473 nt | APPRIS ALT2 TSL 5 BASIC | 2.33 | □□□□□ -2.04 | | |