Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL133547.1-201ENST00000448546 220 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 RPL23AP15-201ENST00000450202 459 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 NAP1L1P3-201ENST00000462291 880 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 PRDX3P4-201ENST00000470828 747 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 AC091860.1-201ENST00000505723 432 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 RNA5SP143-201ENST00000516936 115 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 NARSP2-201ENST00000518524 679 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 AF279873.1-201ENST00000523393 313 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 DEFB109D-201ENST00000529497 240 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 AC008011.1-201ENST00000545989 227 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 SERPINE4P-201ENST00000554978 281 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 AC006960.3-201ENST00000561845 705 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 ZNF971P-201ENST00000562068 1249 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 BNIP3P39-201ENST00000601077 554 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 BRDTP1-201ENST00000605735 677 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 AC144521.1-201ENST00000607148 956 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 AC018754.1-201ENST00000607486 925 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 AL391497.1-201ENST00000608671 547 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 AC099654.8-201ENST00000637757 681 ntBASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
C9orf40Q8IXQ3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 SAGE2P-201ENST00000420011 2126 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 RNU6-1279P-201ENST00000383917 103 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 RSL24D1P1-201ENST00000404972 493 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 RAB9AP3-201ENST00000412737 573 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 PAICSP7-201ENST00000419829 962 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 MTCYBP15-201ENST00000433123 1127 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 BMS1P19-201ENST00000433925 393 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 RAB9AP1-201ENST00000449393 573 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 RPL7P31-201ENST00000450192 724 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 RN7SL93P-201ENST00000463035 293 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AC022034.3-201ENST00000471393 478 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AC104982.1-201ENST00000478775 574 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AC119751.4-201ENST00000507498 357 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AC110792.2-201ENST00000510278 224 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 TRMT10BP1-201ENST00000519377 943 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AC118942.1-201ENST00000529674 1035 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 GTF2IP22-201ENST00000554443 182 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AC122134.1-202ENST00000569111 1201 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 HNRNPCP4-201ENST00000571636 900 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 BPTFP1-201ENST00000579209 492 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AL163642.2-201ENST00000604722 1019 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AC024933.1-201ENST00000608472 348 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AC093673.2-201ENST00000609674 331 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AC000123.2-201ENST00000623124 461 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 CR392039.5-201ENST00000623201 510 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AC034229.5-201ENST00000624258 185 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AC012442.3-202ENST00000636742 206 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 AP000553.6-201ENST00000641242 118 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 ZNF285B-201ENST00000561698 1767 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 XPOTP1-201ENST00000443317 2398 ntBASIC3.43□□□□□ -1.86
C9orf40Q8IXQ3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.42□□□□□ -1.86
C9orf40Q8IXQ3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms