Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPAS3Q8IXF0 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPAS3Q8IXF0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPAS3Q8IXF0 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AC009779.8-201ENST00000641684 4384 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 ZNF72P-201ENST00000425869 1908 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 DOCK11P1-201ENST00000553480 5932 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 RNU6-328P-201ENST00000390887 106 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 Y_RNA.594-201ENST00000410373 140 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AL596448.1-201ENST00000415024 392 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 E2F6P2-201ENST00000420708 748 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 RPS20P5-201ENST00000434808 360 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 RNU7-136P-201ENST00000458819 69 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AC104687.1-201ENST00000485829 412 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 OR51A1P-201ENST00000511110 946 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AC107393.1-201ENST00000512403 346 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 ATP5LP3-201ENST00000514223 304 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 SNORA25.14-201ENST00000516481 132 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AC128657.1-201ENST00000549459 145 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AC010547.6-201ENST00000571789 193 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 MIR4489-201ENST00000578869 62 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 MIR5583-1-201ENST00000580941 59 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AP001521.1-201ENST00000609150 300 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 AC005183.1-201ENST00000603687 1979 ntBASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS3Q8IXF0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 BIN2P1-201ENST00000504996 1530 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 MIR375-201ENST00000362103 64 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 RNU5B-2P-201ENST00000363036 113 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 RNU6-98P-201ENST00000384173 107 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 MIR143-201ENST00000385300 106 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 AL360182.1-201ENST00000397433 468 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 RPS15AP30-201ENST00000420976 390 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 AC092651.1-201ENST00000426110 312 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 AC019185.1-201ENST00000442718 389 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 AL445687.2-201ENST00000458156 728 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 RPL23AP11-201ENST00000475260 469 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 AC114728.1-201ENST00000488289 483 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 Y_RNA.654-201ENST00000497848 106 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 FTH1P8-201ENST00000498161 514 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 AC008945.1-201ENST00000505144 499 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 AC008526.1-201ENST00000509149 338 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 RNU6-397P-201ENST00000516226 104 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 SCARNA16.2-201ENST00000516520 172 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 SNORA70.20-201ENST00000516848 126 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 RNA5SP400-201ENST00000517155 111 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 AC022404.1-201ENST00000555320 273 ntBASIC6.3□□□□□ -1.4
NPAS3Q8IXF0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms