Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 AL049610.1-201ENST00000423374 372 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 TMSB4XP1-201ENST00000424567 135 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 RPL31P54-201ENST00000429803 370 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 MTND2P19-201ENST00000449129 1012 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 RPL23AP56-201ENST00000460778 453 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 AC010307.1-201ENST00000467206 836 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 AC087385.1-201ENST00000475062 312 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 RPL23AP72-201ENST00000492447 435 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 AL024509.2-201ENST00000493462 493 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 HMGB1P21-201ENST00000502313 581 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 SNX5P1-201ENST00000505757 1041 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 RN7SKP277-201ENST00000516895 283 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 OR7K1P-201ENST00000546439 926 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 AL121766.1-201ENST00000547436 487 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 AC008759.1-201ENST00000589783 983 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 BNIP3P22-201ENST00000593399 556 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 AL031320.1-201ENST00000604177 357 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 RN7SKP299-201ENST00000606679 301 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 AL354760.1-201ENST00000608357 643 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 AC008121.2-201ENST00000614647 523 ntBASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HMBOX1Q6NT76 AC099654.2-201ENST00000433031 1980 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 MAPK10-253ENST00000641010 4072 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC010300.1-201ENST00000600671 5134 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC067945.1-201ENST00000342609 618 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 RNU4-21P-201ENST00000362802 126 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 SNORA4.1-201ENST00000364263 144 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 MIR93-201ENST00000385024 80 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 MT-TH-201ENST00000387441 69 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 SNORA26.8-201ENST00000391306 124 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 BTBD10P2-201ENST00000404779 676 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 CHEK2P3-201ENST00000416118 248 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC008065.1-201ENST00000428525 348 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC069285.2-201ENST00000440210 275 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 MRPS33P2-201ENST00000507850 322 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 VWA8P1-201ENST00000510889 176 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 RNU6-1261P-201ENST00000517194 104 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC106038.2-201ENST00000520706 568 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC138915.2-201ENST00000569776 97 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC012213.3-201ENST00000577199 777 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 BNIP3P33-201ENST00000598912 569 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC069304.2-201ENST00000605154 435 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AP001521.2-201ENST00000608772 546 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AL031667.3-201ENST00000620124 655 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC087385.3-201ENST00000620477 187 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC067931.1-201ENST00000624190 671 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC092184.1-201ENST00000625042 715 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC026634.1-201ENST00000634369 198 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC074029.4-201ENST00000624796 1859 ntBASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.36□□□□□ -1.71
HMBOX1Q6NT76 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms