Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MIR4307-201ENST00000582802 84 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 MIR4310-201ENST00000582950 57 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AL669831.4-202ENST00000590817 238 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 RSL24D1P11-201ENST00000591045 491 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AC006329.2-201ENST00000611491 394 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 HULC.1-201ENST00000612720 240 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AC012414.7-202ENST00000622705 1090 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AC093591.3-201ENST00000634516 308 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AL590763.1-201ENST00000398297 1545 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 EOGT-210ENST00000615922 1931 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
RNF220Q5VTB9 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.65□□□□□ -1.66
RNF220Q5VTB9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
RNF220Q5VTB9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
RNF220Q5VTB9 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.65□□□□□ -1.66
RNF220Q5VTB9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.65□□□□□ -1.66
RNF220Q5VTB9 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 OR52B1P-201ENST00000316506 909 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 RN7SKP162-201ENST00000363605 345 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 RNU6-744P-201ENST00000365557 107 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 RNU6-1316P-201ENST00000384242 108 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AL080315.1-201ENST00000406055 466 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 DUTP5-201ENST00000406790 469 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 SNORA77-201ENST00000408716 125 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 EZH2P1-201ENST00000431167 291 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 BX323845.1-201ENST00000432417 179 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 RPL12P11-201ENST00000439970 501 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AL391987.1-201ENST00000441025 200 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 HMGB3P9-201ENST00000441799 583 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AL354714.3-201ENST00000447284 493 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 SCARNA10-201ENST00000459255 330 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AC009127.1-201ENST00000467090 155 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AC006967.1-201ENST00000467608 589 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 HMGB1P36-201ENST00000487709 576 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AC023424.2-201ENST00000493479 777 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AC006499.3-201ENST00000506077 748 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 MTCO3P7-201ENST00000510008 774 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 MTND3P5-201ENST00000512798 333 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 Y_RNA.655-201ENST00000515919 96 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 RNU6-27P-201ENST00000516146 107 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 OR4R3P-201ENST00000525084 838 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AC006362.1-201ENST00000567392 174 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AC008638.3-201ENST00000603341 463 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AL139395.1-201ENST00000603662 160 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AC087752.4-201ENST00000605911 462 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 RNA5SP108-201ENST00000605921 117 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AL133243.1-201ENST00000614487 366 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AL121873.1-201ENST00000616013 524 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AC067931.1-201ENST00000624190 671 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 AC091925.2-201ENST00000625059 256 ntBASIC4.65□□□□□ -1.67
RNF220Q5VTB9 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNF220Q5VTB9 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF220Q5VTB9 AC074029.4-201ENST00000624796 1859 ntBASIC4.64□□□□□ -1.67
RNF220Q5VTB9 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
RNF220Q5VTB9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF220Q5VTB9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNF220Q5VTB9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF220Q5VTB9 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.64□□□□□ -1.67
RNF220Q5VTB9 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF220Q5VTB9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RNF220Q5VTB9 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
RNF220Q5VTB9 RNU6-769P-201ENST00000384407 104 ntBASIC4.64□□□□□ -1.67
RNF220Q5VTB9 RNU6-821P-201ENST00000390995 107 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms