Protein–RNA interactions for Protein: Q15818

NPTX1, Neuronal pentraxin-1, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX1Q15818 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.86□□□□□ -1.79
NPTX1Q15818 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.86□□□□□ -1.79
NPTX1Q15818 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.86□□□□□ -1.79
NPTX1Q15818 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.86□□□□□ -1.79
NPTX1Q15818 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.86□□□□□ -1.79
NPTX1Q15818 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.86□□□□□ -1.79
NPTX1Q15818 LSM6P2-201ENST00000552208 177 ntBASIC3.86□□□□□ -1.79
NPTX1Q15818 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.86□□□□□ -1.79
NPTX1Q15818 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
NPTX1Q15818 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.86□□□□□ -1.79
NPTX1Q15818 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.86□□□□□ -1.79
NPTX1Q15818 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.86□□□□□ -1.79
NPTX1Q15818 AC138915.2-201ENST00000569776 97 ntBASIC3.86□□□□□ -1.79
NPTX1Q15818 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.86□□□□□ -1.79
NPTX1Q15818 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.86□□□□□ -1.79
NPTX1Q15818 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.86□□□□□ -1.79
NPTX1Q15818 AC090948.1-201ENST00000607464 549 ntBASIC3.86□□□□□ -1.79
NPTX1Q15818 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.86□□□□□ -1.79
NPTX1Q15818 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.86□□□□□ -1.79
NPTX1Q15818 AC128687.2-201ENST00000609657 566 ntBASIC3.86□□□□□ -1.79
NPTX1Q15818 AC105429.2-201ENST00000610567 517 ntBASIC3.86□□□□□ -1.79
NPTX1Q15818 MIR486-1-201ENST00000612171 68 ntBASIC3.86□□□□□ -1.79
NPTX1Q15818 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPTX1Q15818 AC023158.2-201ENST00000614876 543 ntBASIC3.86□□□□□ -1.79
NPTX1Q15818 AC068722.2-201ENST00000618734 544 ntBASIC3.86□□□□□ -1.79
NPTX1Q15818 AC006386.1-201ENST00000619436 415 ntBASIC3.86□□□□□ -1.79
NPTX1Q15818 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.86□□□□□ -1.79
NPTX1Q15818 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.86□□□□□ -1.79
NPTX1Q15818 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.86□□□□□ -1.79
NPTX1Q15818 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPTX1Q15818 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPTX1Q15818 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.86□□□□□ -1.79
NPTX1Q15818 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPTX1Q15818 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPTX1Q15818 AL158163.1-201ENST00000603915 1649 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
NPTX1Q15818 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NPTX1Q15818 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
NPTX1Q15818 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.85□□□□□ -1.79
NPTX1Q15818 RNU1-14P-201ENST00000362759 152 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPTX1Q15818 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NPTX1Q15818 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPTX1Q15818 AL023807.1-201ENST00000407932 359 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 MTND4P22-201ENST00000413116 1169 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.85□□□□□ -1.79
NPTX1Q15818 RPL26P29-201ENST00000415623 438 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 P2RY10P2-201ENST00000416730 913 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 RPL7P44-201ENST00000424827 742 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.85□□□□□ -1.79
NPTX1Q15818 USP9YP31-201ENST00000431405 881 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.85□□□□□ -1.79
NPTX1Q15818 AC084290.1-201ENST00000434995 374 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.85□□□□□ -1.79
NPTX1Q15818 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.85□□□□□ -1.79
NPTX1Q15818 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.85□□□□□ -1.79
NPTX1Q15818 RFC5P1-201ENST00000454419 874 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 SNORD11.1-201ENST00000459482 85 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 AC006463.2-201ENST00000473326 348 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 AC010301.1-201ENST00000473936 355 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 RPL31P61-201ENST00000496160 376 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.85□□□□□ -1.79
NPTX1Q15818 AK3P4-201ENST00000504283 583 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.85□□□□□ -1.79
NPTX1Q15818 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.85□□□□□ -1.79
NPTX1Q15818 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPTX1Q15818 AC092593.2-201ENST00000513866 913 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 MTCO1P30-201ENST00000515244 580 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.85□□□□□ -1.79
NPTX1Q15818 RNU6-1225P-201ENST00000516336 65 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 RNA5SP519-201ENST00000516480 119 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.85□□□□□ -1.79
NPTX1Q15818 AC027309.2-201ENST00000520566 192 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPTX1Q15818 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.85□□□□□ -1.79
NPTX1Q15818 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.85□□□□□ -1.79
NPTX1Q15818 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.85□□□□□ -1.79
NPTX1Q15818 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.85□□□□□ -1.79
NPTX1Q15818 MIR4330-201ENST00000579077 105 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 LLPHP1-201ENST00000603571 367 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 AC007566.2-201ENST00000603642 413 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 AC019193.2-201ENST00000610012 634 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.85□□□□□ -1.79
NPTX1Q15818 AC006963.1-201ENST00000624003 1052 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 MKKS-204ENST00000639674 192 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 AC109315.1-201ENST00000584143 1347 ntBASIC3.85□□□□□ -1.79
NPTX1Q15818 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPTX1Q15818 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPTX1Q15818 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NPTX1Q15818 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
NPTX1Q15818 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
NPTX1Q15818 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NPTX1Q15818 SNORD6-201ENST00000365444 73 ntBASIC3.84□□□□□ -1.79
NPTX1Q15818 SNORD116.1-201ENST00000365628 92 ntBASIC3.84□□□□□ -1.79
NPTX1Q15818 SNORA56-201ENST00000383966 129 ntBASIC3.84□□□□□ -1.79
NPTX1Q15818 RNU6-398P-201ENST00000384143 109 ntBASIC3.84□□□□□ -1.79
NPTX1Q15818 RPS3AP25-201ENST00000411660 793 ntBASIC3.84□□□□□ -1.79
NPTX1Q15818 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.84□□□□□ -1.79
NPTX1Q15818 MTND2P16-201ENST00000419987 799 ntBASIC3.84□□□□□ -1.79
NPTX1Q15818 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms