Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCH1Q13635 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCH1Q13635 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCH1Q13635 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PTCH1Q13635 AC073136.2-201ENST00000417282 849 ntBASIC4.53□□□□□ -1.68
PTCH1Q13635 AL121890.1-201ENST00000435457 205 ntBASIC4.53□□□□□ -1.68
PTCH1Q13635 MTND3P6-201ENST00000485242 339 ntBASIC4.53□□□□□ -1.68
PTCH1Q13635 PCBP2P3-201ENST00000509726 843 ntBASIC4.53□□□□□ -1.68
PTCH1Q13635 AC026801.2-201ENST00000515352 425 ntBASIC4.53□□□□□ -1.68
PTCH1Q13635 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
PTCH1Q13635 TRAV11-201ENST00000539512 339 ntBASIC4.53□□□□□ -1.68
PTCH1Q13635 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.53□□□□□ -1.68
PTCH1Q13635 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.53□□□□□ -1.68
PTCH1Q13635 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.53□□□□□ -1.68
PTCH1Q13635 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.53□□□□□ -1.68
PTCH1Q13635 AL162713.1-201ENST00000604480 262 ntBASIC4.53□□□□□ -1.68
PTCH1Q13635 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.53□□□□□ -1.68
PTCH1Q13635 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PTCH1Q13635 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTCH1Q13635 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTCH1Q13635 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.52□□□□□ -1.69
PTCH1Q13635 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTCH1Q13635 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.52□□□□□ -1.69
PTCH1Q13635 RPL23AP82-202ENST00000427528 469 ntBASIC4.52□□□□□ -1.69
PTCH1Q13635 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.52□□□□□ -1.69
PTCH1Q13635 CENPBD1P1-201ENST00000464061 469 ntBASIC4.52□□□□□ -1.69
PTCH1Q13635 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.52□□□□□ -1.69
PTCH1Q13635 RPS29P26-201ENST00000477483 171 ntBASIC4.52□□□□□ -1.69
PTCH1Q13635 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.52□□□□□ -1.69
PTCH1Q13635 AC091826.1-201ENST00000514065 313 ntBASIC4.52□□□□□ -1.69
PTCH1Q13635 RNU6-491P-201ENST00000516099 110 ntBASIC4.52□□□□□ -1.69
PTCH1Q13635 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.52□□□□□ -1.69
PTCH1Q13635 SMARCE1P4-201ENST00000523647 241 ntBASIC4.52□□□□□ -1.69
PTCH1Q13635 AC068446.3-201ENST00000555285 382 ntBASIC4.52□□□□□ -1.69
PTCH1Q13635 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.52□□□□□ -1.69
PTCH1Q13635 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.52□□□□□ -1.69
PTCH1Q13635 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.52□□□□□ -1.69
PTCH1Q13635 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PTCH1Q13635 AP003485.2-201ENST00000623636 610 ntBASIC4.52□□□□□ -1.69
PTCH1Q13635 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PTCH1Q13635 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTCH1Q13635 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PTCH1Q13635 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTCH1Q13635 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.52□□□□□ -1.69
PTCH1Q13635 AL359715.4-201ENST00000606629 1436 ntBASIC4.52□□□□□ -1.69
PTCH1Q13635 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PTCH1Q13635 AC017071.1-201ENST00000564407 2204 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
PTCH1Q13635 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
PTCH1Q13635 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTCH1Q13635 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PTCH1Q13635 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.51□□□□□ -1.69
PTCH1Q13635 MIR92A2-201ENST00000385299 75 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 AL356806.1-201ENST00000422524 916 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 AC073464.3-201ENST00000422564 712 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.51□□□□□ -1.69
PTCH1Q13635 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.51□□□□□ -1.69
PTCH1Q13635 NDUFA5P10-201ENST00000432147 357 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 AL606490.7-201ENST00000433136 191 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.51□□□□□ -1.69
PTCH1Q13635 Z99127.2-201ENST00000441426 334 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 ELOCP23-201ENST00000452014 332 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 BX276092.4-201ENST00000452056 248 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 FCF1P3-201ENST00000496394 590 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 AC104997.1-201ENST00000519761 717 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.51□□□□□ -1.69
PTCH1Q13635 AC074029.2-201ENST00000551045 634 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.51□□□□□ -1.69
PTCH1Q13635 AC106785.3-201ENST00000564064 847 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 MIR4738-201ENST00000579134 87 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 uc_338.9-201ENST00000617424 182 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.51□□□□□ -1.69
PTCH1Q13635 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTCH1Q13635 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.51□□□□□ -1.69
PTCH1Q13635 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
PTCH1Q13635 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTCH1Q13635 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.51□□□□□ -1.69
PTCH1Q13635 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.51□□□□□ -1.69
PTCH1Q13635 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTCH1Q13635 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTCH1Q13635 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
PTCH1Q13635 AC006504.1-201ENST00000562493 3666 ntBASIC4.5□□□□□ -1.69
PTCH1Q13635 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.5□□□□□ -1.69
PTCH1Q13635 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PTCH1Q13635 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
PTCH1Q13635 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTCH1Q13635 AL445529.1-201ENST00000398713 389 ntBASIC4.5□□□□□ -1.69
PTCH1Q13635 DHFRP5-201ENST00000406944 564 ntBASIC4.5□□□□□ -1.69
PTCH1Q13635 MIR1261-201ENST00000408659 82 ntBASIC4.5□□□□□ -1.69
PTCH1Q13635 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.5□□□□□ -1.69
PTCH1Q13635 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.5□□□□□ -1.69
PTCH1Q13635 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCH1Q13635 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCH1Q13635 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.5□□□□□ -1.69
PTCH1Q13635 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.5□□□□□ -1.69
PTCH1Q13635 ACTG1P13-201ENST00000486987 1043 ntBASIC4.5□□□□□ -1.69
PTCH1Q13635 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCH1Q13635 AL035404.1-201ENST00000497982 568 ntBASIC4.5□□□□□ -1.69
PTCH1Q13635 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.5□□□□□ -1.69
PTCH1Q13635 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms