Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
LMO4P61968 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LMO4P61968 Y_RNA.192-201ENST00000363977 102 ntBASIC3.48□□□□□ -1.85
LMO4P61968 snoZ40.1-201ENST00000364540 72 ntBASIC3.48□□□□□ -1.85
LMO4P61968 Y_RNA.465-201ENST00000384293 102 ntBASIC3.48□□□□□ -1.85
LMO4P61968 RNU11-4P-201ENST00000391149 133 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AL079342.2-201ENST00000403367 482 ntBASIC3.48□□□□□ -1.85
LMO4P61968 SNORA11C-201ENST00000408532 129 ntBASIC3.48□□□□□ -1.85
LMO4P61968 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.48□□□□□ -1.85
LMO4P61968 AF274854.1-201ENST00000413236 615 ntBASIC3.48□□□□□ -1.85
LMO4P61968 MTCO3P41-201ENST00000414801 328 ntBASIC3.48□□□□□ -1.85
LMO4P61968 RPL36AP36-201ENST00000418616 301 ntBASIC3.48□□□□□ -1.85
LMO4P61968 UBTFL3-201ENST00000418934 1024 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC114814.2-201ENST00000419195 485 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC098592.1-201ENST00000419352 333 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.48□□□□□ -1.85
LMO4P61968 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.48□□□□□ -1.85
LMO4P61968 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LMO4P61968 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.48□□□□□ -1.85
LMO4P61968 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.48□□□□□ -1.85
LMO4P61968 YWHAEP5-201ENST00000431545 765 ntBASIC3.48□□□□□ -1.85
LMO4P61968 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.48□□□□□ -1.85
LMO4P61968 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.48□□□□□ -1.85
LMO4P61968 AC105402.2-201ENST00000438503 358 ntBASIC3.48□□□□□ -1.85
LMO4P61968 RPL23AP46-201ENST00000438548 490 ntBASIC3.48□□□□□ -1.85
LMO4P61968 UBE2V1P5-201ENST00000440070 405 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC009263.1-201ENST00000441193 1239 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC092809.1-201ENST00000441469 474 ntBASIC3.48□□□□□ -1.85
LMO4P61968 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LMO4P61968 MTND1P1-201ENST00000445453 368 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.48□□□□□ -1.85
LMO4P61968 HMGB1P48-201ENST00000446155 598 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC239367.2-201ENST00000447309 705 ntBASIC3.48□□□□□ -1.85
LMO4P61968 RPS27AP15-201ENST00000447672 466 ntBASIC3.48□□□□□ -1.85
LMO4P61968 NPM1P49-201ENST00000448027 714 ntBASIC3.48□□□□□ -1.85
LMO4P61968 RPL7P31-201ENST00000450192 724 ntBASIC3.48□□□□□ -1.85
LMO4P61968 DNAJC19P8-201ENST00000452887 259 ntBASIC3.48□□□□□ -1.85
LMO4P61968 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AL109741.2-201ENST00000455561 343 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.48□□□□□ -1.85
LMO4P61968 RPS4XP12-201ENST00000461747 709 ntBASIC3.48□□□□□ -1.85
LMO4P61968 UBTFL6-201ENST00000477929 1024 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AF213884.1-201ENST00000488102 463 ntBASIC3.48□□□□□ -1.85
LMO4P61968 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.48□□□□□ -1.85
LMO4P61968 AC084024.2-201ENST00000503480 791 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.48□□□□□ -1.85
LMO4P61968 AC021146.8-201ENST00000507455 733 ntBASIC3.48□□□□□ -1.85
LMO4P61968 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.48□□□□□ -1.85
LMO4P61968 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LMO4P61968 AC116353.3-201ENST00000511215 249 ntBASIC3.48□□□□□ -1.85
LMO4P61968 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.48□□□□□ -1.85
LMO4P61968 snoZ278.1-201ENST00000517059 112 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.48□□□□□ -1.85
LMO4P61968 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.48□□□□□ -1.85
LMO4P61968 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.48□□□□□ -1.85
LMO4P61968 DYNLL1P4-201ENST00000549314 266 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.48□□□□□ -1.85
LMO4P61968 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.48□□□□□ -1.85
LMO4P61968 HMGB3P26-201ENST00000560051 582 ntBASIC3.48□□□□□ -1.85
LMO4P61968 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.48□□□□□ -1.85
LMO4P61968 CYP2C60P-201ENST00000566088 139 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC010546.1-201ENST00000569391 485 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.48□□□□□ -1.85
LMO4P61968 RSL24D1P11-201ENST00000591045 491 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC022916.3-201ENST00000592961 742 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC078795.2-201ENST00000602835 1252 ntBASIC3.48□□□□□ -1.85
LMO4P61968 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC099676.1-201ENST00000608886 657 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AP000254.1-201ENST00000609934 520 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AL592148.2-201ENST00000612210 372 ntBASIC3.48□□□□□ -1.85
LMO4P61968 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LMO4P61968 AL353726.1-201ENST00000614041 1000 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC018926.3-201ENST00000618841 406 ntBASIC3.48□□□□□ -1.85
LMO4P61968 VN1R7P-201ENST00000619242 903 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC140113.4-201ENST00000622087 222 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC109454.4-201ENST00000623411 649 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AC019278.1-201ENST00000623516 479 ntBASIC3.48□□□□□ -1.85
LMO4P61968 AP001642.1-201ENST00000624727 2117 ntBASIC3.48□□□□□ -1.85
LMO4P61968 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.48□□□□□ -1.85
LMO4P61968 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
LMO4P61968 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
LMO4P61968 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.48□□□□□ -1.85
LMO4P61968 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LMO4P61968 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC3.48□□□□□ -1.85
LMO4P61968 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LMO4P61968 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.48□□□□□ -1.85
LMO4P61968 AC073055.1-201ENST00000456901 1621 ntBASIC3.48□□□□□ -1.85
LMO4P61968 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LMO4P61968 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LMO4P61968 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
LMO4P61968 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LMO4P61968 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.47□□□□□ -1.85
LMO4P61968 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.47□□□□□ -1.85
LMO4P61968 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
LMO4P61968 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LMO4P61968 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LMO4P61968 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
LMO4P61968 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LMO4P61968 RNA5SP513-201ENST00000364648 118 ntBASIC3.47□□□□□ -1.85
LMO4P61968 RNA5SP22-201ENST00000365393 109 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms