Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 NACAP2-201ENST00000318548 624 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
GFRA1P56159 RNA5SP234-201ENST00000363916 119 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 Y_RNA.535-201ENST00000384612 99 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 MIR19A-201ENST00000384878 82 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 RNU11-201ENST00000387069 134 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 RN7SKP229-201ENST00000410465 302 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 AL590609.2-201ENST00000421430 368 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.04□□□□□ -1.6
GFRA1P56159 OR6D1P-201ENST00000436165 939 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 CYCSP51-201ENST00000443545 318 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 NANOGP10-201ENST00000453325 895 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.04□□□□□ -1.6
GFRA1P56159 AC108693.1-201ENST00000496068 432 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 GAPDHP56-201ENST00000506031 988 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 TMEM248P1-201ENST00000510579 951 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 MTND6P2-201ENST00000512226 524 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.04□□□□□ -1.6
GFRA1P56159 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.04□□□□□ -1.6
GFRA1P56159 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.04□□□□□ -1.6
GFRA1P56159 AC137627.1-201ENST00000545761 289 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.04□□□□□ -1.6
GFRA1P56159 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.04□□□□□ -1.6
GFRA1P56159 AC007424.1-203ENST00000554613 687 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.04□□□□□ -1.6
GFRA1P56159 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.04□□□□□ -1.6
GFRA1P56159 AC012616.1-201ENST00000600294 197 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 AL360012.1-201ENST00000602813 131 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 AC104687.2-201ENST00000604442 342 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 AL451044.1-201ENST00000604867 238 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 AC004908.2-201ENST00000609090 574 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 AC245517.5-201ENST00000611529 162 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 AL354950.2-201ENST00000617939 290 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 AC132068.1-201ENST00000623805 459 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
GFRA1P56159 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA1P56159 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.04□□□□□ -1.6
GFRA1P56159 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.04□□□□□ -1.6
GFRA1P56159 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
GFRA1P56159 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA1P56159 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA1P56159 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA1P56159 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.04□□□□□ -1.6
GFRA1P56159 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
GFRA1P56159 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA1P56159 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA1P56159 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
GFRA1P56159 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.03□□□□□ -1.6
GFRA1P56159 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA1P56159 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA1P56159 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA1P56159 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
GFRA1P56159 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA1P56159 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA1P56159 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA1P56159 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA1P56159 RNU5E-8P-201ENST00000363502 116 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 RNU6-606P-201ENST00000384721 111 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
GFRA1P56159 RNU6-278P-201ENST00000390945 109 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AC005042.1-201ENST00000393397 800 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AL591416.1-201ENST00000404015 867 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AL391361.1-201ENST00000405580 489 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AL009179.1-201ENST00000406085 265 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AL354719.1-201ENST00000406535 843 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AC096921.1-201ENST00000411661 375 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 METTL15P3-201ENST00000415522 1221 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 MTCO3P12-201ENST00000416718 547 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 SDCBPP3-201ENST00000419629 891 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 TMEM183AP1-205ENST00000432739 290 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.03□□□□□ -1.6
GFRA1P56159 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA1P56159 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.03□□□□□ -1.6
GFRA1P56159 AL356010.1-201ENST00000456364 102 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.03□□□□□ -1.6
GFRA1P56159 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 RPS27AP17-201ENST00000463344 455 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AC078785.3-201ENST00000476607 425 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 RN7SL184P-201ENST00000488308 297 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.03□□□□□ -1.6
GFRA1P56159 MTCO3P44-201ENST00000510977 541 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.03□□□□□ -1.6
GFRA1P56159 RNU6-27P-201ENST00000516146 107 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.03□□□□□ -1.6
GFRA1P56159 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.03□□□□□ -1.6
GFRA1P56159 IGKV2-18-201ENST00000522607 343 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.03□□□□□ -1.6
GFRA1P56159 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.03□□□□□ -1.6
GFRA1P56159 AC007225.2-201ENST00000562529 256 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 GLUD1P4-201ENST00000590914 418 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AL355812.1-201ENST00000603215 216 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AC013553.2-201ENST00000604244 589 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AC015908.5-201ENST00000623289 343 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.03□□□□□ -1.6
GFRA1P56159 AL596275.2-204ENST00000641628 552 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 AL596275.2-206ENST00000641957 626 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
GFRA1P56159 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms