Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CYP1D1P-201ENST00000416662 1433 ntBASIC4.13□□□□□ -1.75
CDH12P55289 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH12P55289 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CDH12P55289 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.13□□□□□ -1.75
CDH12P55289 RNA5SP307-201ENST00000362863 116 ntBASIC4.13□□□□□ -1.75
CDH12P55289 RNA5SP88-201ENST00000365560 109 ntBASIC4.13□□□□□ -1.75
CDH12P55289 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CDH12P55289 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CDH12P55289 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH12P55289 SNRPEP2-201ENST00000397592 279 ntBASIC4.13□□□□□ -1.75
CDH12P55289 AL512430.2-201ENST00000406786 339 ntBASIC4.13□□□□□ -1.75
CDH12P55289 AC073264.1-201ENST00000411508 416 ntBASIC4.13□□□□□ -1.75
CDH12P55289 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH12P55289 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH12P55289 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH12P55289 AC006366.1-201ENST00000422002 759 ntBASIC4.13□□□□□ -1.75
CDH12P55289 AL158073.1-201ENST00000426848 1104 ntBASIC4.13□□□□□ -1.75
CDH12P55289 RPS12P10-201ENST00000427031 377 ntBASIC4.13□□□□□ -1.75
CDH12P55289 CEACAMP1-201ENST00000434624 1035 ntBASIC4.13□□□□□ -1.75
CDH12P55289 VN1R54P-201ENST00000435210 1049 ntBASIC4.13□□□□□ -1.75
CDH12P55289 HLA-N-201ENST00000437516 135 ntBASIC4.13□□□□□ -1.75
CDH12P55289 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH12P55289 AC092427.1-201ENST00000439177 601 ntBASIC4.13□□□□□ -1.75
CDH12P55289 MTCO1P19-201ENST00000443487 500 ntBASIC4.13□□□□□ -1.75
CDH12P55289 RPL36AP33-201ENST00000450395 310 ntBASIC4.13□□□□□ -1.75
CDH12P55289 AC006967.1-201ENST00000467608 589 ntBASIC4.13□□□□□ -1.75
CDH12P55289 OR52A4P-201ENST00000472867 958 ntBASIC4.13□□□□□ -1.75
CDH12P55289 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH12P55289 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH12P55289 AC011005.3-201ENST00000491624 395 ntBASIC4.13□□□□□ -1.75
CDH12P55289 OR7H2P-201ENST00000513483 306 ntBASIC4.13□□□□□ -1.75
CDH12P55289 AC022447.1-201ENST00000515358 464 ntBASIC4.13□□□□□ -1.75
CDH12P55289 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH12P55289 BRD9P1-201ENST00000529855 560 ntBASIC4.13□□□□□ -1.75
CDH12P55289 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH12P55289 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH12P55289 AC137768.1-201ENST00000549998 553 ntBASIC4.13□□□□□ -1.75
CDH12P55289 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH12P55289 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH12P55289 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH12P55289 AC012213.3-201ENST00000577199 777 ntBASIC4.13□□□□□ -1.75
CDH12P55289 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH12P55289 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH12P55289 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH12P55289 AC025165.5-201ENST00000602802 578 ntBASIC4.13□□□□□ -1.75
CDH12P55289 AC005191.1-201ENST00000603950 358 ntBASIC4.13□□□□□ -1.75
CDH12P55289 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH12P55289 AC013562.2-201ENST00000611632 603 ntBASIC4.13□□□□□ -1.75
CDH12P55289 AL359535.1-201ENST00000612100 1087 ntBASIC4.13□□□□□ -1.75
CDH12P55289 AC009237.17-201ENST00000618111 748 ntBASIC4.13□□□□□ -1.75
CDH12P55289 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH12P55289 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.13□□□□□ -1.75
CDH12P55289 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.13□□□□□ -1.75
CDH12P55289 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CDH12P55289 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH12P55289 AL445437.1-201ENST00000623157 3087 ntBASIC4.13□□□□□ -1.75
CDH12P55289 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH12P55289 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH12P55289 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CDH12P55289 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CDH12P55289 LINC00622-201ENST00000562811 1570 ntBASIC4.13□□□□□ -1.75
CDH12P55289 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDH12P55289 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDH12P55289 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH12P55289 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH12P55289 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CDH12P55289 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH12P55289 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH12P55289 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDH12P55289 RNU1-85P-201ENST00000364127 164 ntBASIC4.12□□□□□ -1.75
CDH12P55289 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDH12P55289 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CDH12P55289 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDH12P55289 AL355379.1-201ENST00000405542 640 ntBASIC4.12□□□□□ -1.75
CDH12P55289 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.12□□□□□ -1.75
CDH12P55289 PRELID3BP10-201ENST00000431957 584 ntBASIC4.12□□□□□ -1.75
CDH12P55289 BMS1P19-201ENST00000433925 393 ntBASIC4.12□□□□□ -1.75
CDH12P55289 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH12P55289 AL138878.2-201ENST00000440581 1241 ntBASIC4.12□□□□□ -1.75
CDH12P55289 EEF1E1P1-201ENST00000446998 430 ntBASIC4.12□□□□□ -1.75
CDH12P55289 PTMAP3-201ENST00000447474 330 ntBASIC4.12□□□□□ -1.75
CDH12P55289 EPS15P1-201ENST00000448836 336 ntBASIC4.12□□□□□ -1.75
CDH12P55289 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH12P55289 AC012671.1-201ENST00000451912 203 ntBASIC4.12□□□□□ -1.75
CDH12P55289 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH12P55289 AC092757.1-201ENST00000467293 467 ntBASIC4.12□□□□□ -1.75
CDH12P55289 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.12□□□□□ -1.75
CDH12P55289 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDH12P55289 AC006499.5-201ENST00000505037 514 ntBASIC4.12□□□□□ -1.75
CDH12P55289 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH12P55289 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH12P55289 AC006499.2-201ENST00000513470 337 ntBASIC4.12□□□□□ -1.75
CDH12P55289 RNA5SP154-201ENST00000516193 111 ntBASIC4.12□□□□□ -1.75
CDH12P55289 RNA5SP228-201ENST00000516232 133 ntBASIC4.12□□□□□ -1.75
CDH12P55289 IFITM8P-201ENST00000522529 394 ntBASIC4.12□□□□□ -1.75
CDH12P55289 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH12P55289 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH12P55289 AC239860.2-201ENST00000525886 270 ntBASIC4.12□□□□□ -1.75
CDH12P55289 AC087276.1-201ENST00000529659 480 ntBASIC4.12□□□□□ -1.75
CDH12P55289 OR6C7P-201ENST00000547875 934 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms