Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ATXN3P54252 AC027287.1-201ENST00000553115 1453 ntBASIC3.97□□□□□ -1.77
ATXN3P54252 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.96□□□□□ -1.77
ATXN3P54252 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
ATXN3P54252 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
ATXN3P54252 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
ATXN3P54252 AC073346.2-201ENST00000624724 2058 ntBASIC3.96□□□□□ -1.77
ATXN3P54252 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
ATXN3P54252 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATXN3P54252 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
ATXN3P54252 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATXN3P54252 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.96□□□□□ -1.78
ATXN3P54252 SNORA31-201ENST00000362607 130 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 SNORA5A-201ENST00000384111 134 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 SNORA9-201ENST00000384215 133 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 MTND4P22-201ENST00000413116 1169 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 BX664727.1-201ENST00000416024 466 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 EI24P1-201ENST00000416584 867 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 AC068533.1-201ENST00000418542 415 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 HMGN2P31-201ENST00000432430 273 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 RPL7P28-201ENST00000437739 740 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 AF228730.2-201ENST00000438784 848 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.96□□□□□ -1.78
ATXN3P54252 AC010307.1-201ENST00000467206 836 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.96□□□□□ -1.78
ATXN3P54252 TMED11P-201ENST00000479478 690 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.96□□□□□ -1.78
ATXN3P54252 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATXN3P54252 AC109458.1-201ENST00000508858 316 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.96□□□□□ -1.78
ATXN3P54252 AC010342.1-201ENST00000514047 877 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 AC093853.1-201ENST00000515689 483 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.96□□□□□ -1.78
ATXN3P54252 AP003049.1-201ENST00000529418 457 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 OR8K4P-201ENST00000534608 872 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 AC107016.1-201ENST00000550463 337 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.96□□□□□ -1.78
ATXN3P54252 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.96□□□□□ -1.78
ATXN3P54252 BPTFP1-201ENST00000579209 492 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.96□□□□□ -1.78
ATXN3P54252 OR4G1P-201ENST00000588632 938 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.96□□□□□ -1.78
ATXN3P54252 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.96□□□□□ -1.78
ATXN3P54252 U3.45-201ENST00000607547 219 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 AC016542.1-201ENST00000608259 493 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 AC090246.1-201ENST00000616499 426 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.96□□□□□ -1.78
ATXN3P54252 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATXN3P54252 AL139089.1-201ENST00000620372 975 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATXN3P54252 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
ATXN3P54252 FAM35DP-201ENST00000323387 2712 ntBASIC3.96□□□□□ -1.78
ATXN3P54252 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATXN3P54252 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.96□□□□□ -1.78
ATXN3P54252 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATXN3P54252 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATXN3P54252 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN3P54252 MTCO1P12-201ENST00000414273 1543 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.95□□□□□ -1.78
ATXN3P54252 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN3P54252 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
ATXN3P54252 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
ATXN3P54252 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.95□□□□□ -1.78
ATXN3P54252 ZNF849P-201ENST00000594711 1566 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
ATXN3P54252 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN3P54252 RNA5SP322-201ENST00000363617 119 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN3P54252 SNORD65C-201ENST00000390962 71 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 RPL21P17-201ENST00000397467 475 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 ZNF602P-201ENST00000405929 924 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 PGBD4P8-201ENST00000412993 562 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.95□□□□□ -1.78
ATXN3P54252 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.95□□□□□ -1.78
ATXN3P54252 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.95□□□□□ -1.78
ATXN3P54252 AC011742.1-201ENST00000431448 434 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.95□□□□□ -1.78
ATXN3P54252 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN3P54252 AC006994.1-201ENST00000438212 839 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.95□□□□□ -1.78
ATXN3P54252 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.95□□□□□ -1.78
ATXN3P54252 RAD23BP3-201ENST00000454157 1152 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.95□□□□□ -1.78
ATXN3P54252 RPL32P14-201ENST00000463196 378 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 AC092451.1-201ENST00000480211 153 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.95□□□□□ -1.78
ATXN3P54252 AC005726.1-201ENST00000494679 427 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN3P54252 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN3P54252 MTCO2P9-201ENST00000503214 694 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN3P54252 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
ATXN3P54252 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN3P54252 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN3P54252 AC104057.1-201ENST00000515547 497 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 IGKV2D-19-201ENST00000523346 262 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.95□□□□□ -1.78
ATXN3P54252 AC079171.1-201ENST00000568788 914 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 IGHV3-29-201ENST00000604817 344 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms