Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL713998.2-201ENST00000604538 1198 ntBASIC3.12□□□□□ -1.91
GTF2A1P52655 AL162274.2-201ENST00000614406 332 ntBASIC3.12□□□□□ -1.91
GTF2A1P52655 CYCSP41-201ENST00000616920 296 ntBASIC3.12□□□□□ -1.91
GTF2A1P52655 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.12□□□□□ -1.91
GTF2A1P52655 AC073342.3-201ENST00000624211 193 ntBASIC3.12□□□□□ -1.91
GTF2A1P52655 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
GTF2A1P52655 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.12□□□□□ -1.91
GTF2A1P52655 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.12□□□□□ -1.91
GTF2A1P52655 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.12□□□□□ -1.91
GTF2A1P52655 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
GTF2A1P52655 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.12□□□□□ -1.91
GTF2A1P52655 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
GTF2A1P52655 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.11□□□□□ -1.91
GTF2A1P52655 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
GTF2A1P52655 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.11□□□□□ -1.91
GTF2A1P52655 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
GTF2A1P52655 MTND2P15-201ENST00000418575 892 ntBASIC3.11□□□□□ -1.91
GTF2A1P52655 AL117339.2-201ENST00000430475 180 ntBASIC3.11□□□□□ -1.91
GTF2A1P52655 UBBP3-201ENST00000445497 241 ntBASIC3.11□□□□□ -1.91
GTF2A1P52655 Z96811.1-201ENST00000445880 108 ntBASIC3.11□□□□□ -1.91
GTF2A1P52655 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.11□□□□□ -1.91
GTF2A1P52655 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.11□□□□□ -1.91
GTF2A1P52655 RN7SL385P-201ENST00000468873 276 ntBASIC3.11□□□□□ -1.91
GTF2A1P52655 RPL7P23-201ENST00000493874 747 ntBASIC3.11□□□□□ -1.91
GTF2A1P52655 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.11□□□□□ -1.91
GTF2A1P52655 TBCAP3-201ENST00000512475 312 ntBASIC3.11□□□□□ -1.91
GTF2A1P52655 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.11□□□□□ -1.91
GTF2A1P52655 RNU4-60P-201ENST00000517239 135 ntBASIC3.11□□□□□ -1.91
GTF2A1P52655 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
GTF2A1P52655 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.11□□□□□ -1.91
GTF2A1P52655 CYCSP30-201ENST00000546447 172 ntBASIC3.11□□□□□ -1.91
GTF2A1P52655 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.11□□□□□ -1.91
GTF2A1P52655 AC087499.8-201ENST00000578406 226 ntBASIC3.11□□□□□ -1.91
GTF2A1P52655 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.11□□□□□ -1.91
GTF2A1P52655 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.11□□□□□ -1.91
GTF2A1P52655 AC019131.2-201ENST00000609071 870 ntBASIC3.11□□□□□ -1.91
GTF2A1P52655 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.11□□□□□ -1.91
GTF2A1P52655 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.11□□□□□ -1.91
GTF2A1P52655 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
GTF2A1P52655 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
GTF2A1P52655 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
GTF2A1P52655 AC090337.1-201ENST00000579651 2074 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
GTF2A1P52655 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
GTF2A1P52655 SNORA25.6-201ENST00000364121 118 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 SNORA62-201ENST00000365493 153 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
GTF2A1P52655 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
GTF2A1P52655 SNORA81-201ENST00000408493 178 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 RNU2-71P-201ENST00000411395 189 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.1□□□□□ -1.91
GTF2A1P52655 BRWD1P3-201ENST00000428816 390 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 AC129850.1-201ENST00000436203 508 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.1□□□□□ -1.91
GTF2A1P52655 RPL17P49-201ENST00000443728 411 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 NF1P3-201ENST00000457709 450 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 RPL23AP12-201ENST00000467573 473 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 AC146507.1-201ENST00000468335 354 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 RN7SL297P-201ENST00000483161 293 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.1□□□□□ -1.91
GTF2A1P52655 AP002812.1-201ENST00000495378 474 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 AC093853.1-201ENST00000515689 483 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 C1GALT1P3-201ENST00000522049 819 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.1□□□□□ -1.91
GTF2A1P52655 AC107016.2-201ENST00000547968 190 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.1□□□□□ -1.91
GTF2A1P52655 AC087888.1-201ENST00000550884 1254 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.1□□□□□ -1.91
GTF2A1P52655 MIR4284-201ENST00000578924 81 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
GTF2A1P52655 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
GTF2A1P52655 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
GTF2A1P52655 AC006249.1-201ENST00000621223 471 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 MIR6730-201ENST00000622213 67 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 AC112200.1-201ENST00000625015 234 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
GTF2A1P52655 AP002907.1-201ENST00000606361 1430 ntBASIC3.1□□□□□ -1.91
GTF2A1P52655 AF117829.1-206ENST00000621883 3802 ntBASIC3.09□□□□□ -1.91
GTF2A1P52655 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
GTF2A1P52655 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
GTF2A1P52655 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.09□□□□□ -1.91
GTF2A1P52655 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.09□□□□□ -1.91
GTF2A1P52655 AC073055.1-201ENST00000456901 1621 ntBASIC3.09□□□□□ -1.91
GTF2A1P52655 SPRR2C-201ENST00000290702 219 ntBASIC3.09□□□□□ -1.91
GTF2A1P52655 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
GTF2A1P52655 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.09□□□□□ -1.91
GTF2A1P52655 SNORA70C-201ENST00000384538 135 ntBASIC3.09□□□□□ -1.91
GTF2A1P52655 MIR585-201ENST00000384887 94 ntBASIC3.09□□□□□ -1.91
GTF2A1P52655 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
GTF2A1P52655 CYCSP4-201ENST00000429682 331 ntBASIC3.09□□□□□ -1.91
GTF2A1P52655 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
GTF2A1P52655 RPL21P41-201ENST00000459863 264 ntBASIC3.09□□□□□ -1.91
GTF2A1P52655 AC021205.1-201ENST00000468797 348 ntBASIC3.09□□□□□ -1.91
GTF2A1P52655 AC023598.1-201ENST00000472521 361 ntBASIC3.09□□□□□ -1.91
GTF2A1P52655 TPT1P3-201ENST00000492841 512 ntBASIC3.09□□□□□ -1.91
GTF2A1P52655 SEM1P1-201ENST00000506694 209 ntBASIC3.09□□□□□ -1.91
GTF2A1P52655 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.09□□□□□ -1.91
GTF2A1P52655 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.09□□□□□ -1.91
GTF2A1P52655 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.09□□□□□ -1.91
GTF2A1P52655 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms