Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXD12P35452 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXD12P35452 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXD12P35452 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD12P35452 AC019178.2-201ENST00000423595 505 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 AL022400.1-201ENST00000423946 935 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 SKP1P3-201ENST00000429280 487 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXD12P35452 AC098826.1-201ENST00000433943 471 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 RAB11AP1-201ENST00000442978 646 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 RPS15AP1-201ENST00000457423 391 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 ACTG1P13-201ENST00000486987 1043 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXD12P35452 AC147055.4-201ENST00000504399 745 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXD12P35452 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXD12P35452 RN7SKP31-201ENST00000516354 278 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXD12P35452 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXD12P35452 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXD12P35452 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXD12P35452 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXD12P35452 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXD12P35452 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD12P35452 AC105129.1-201ENST00000560250 297 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXD12P35452 AC005951.1-201ENST00000576706 485 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXD12P35452 BNIP3P33-201ENST00000598912 569 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXD12P35452 AC004223.4-201ENST00000612426 332 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 AL022401.1-201ENST00000619498 108 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 AC124312.6-202ENST00000623624 418 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 AC098679.4-201ENST00000624241 654 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD12P35452 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD12P35452 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
HOXD12P35452 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD12P35452 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXD12P35452 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXD12P35452 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
HOXD12P35452 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXD12P35452 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.65□□□□□ -1.66
HOXD12P35452 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
HOXD12P35452 RNU6-582P-201ENST00000362989 107 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 Y_RNA.201-201ENST00000364052 96 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 ZNF603P-201ENST00000405613 487 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 AL080315.1-201ENST00000406055 466 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 RPL23AP47-201ENST00000408017 460 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 RPL21P108-201ENST00000413857 481 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.65□□□□□ -1.67
HOXD12P35452 TMBIM7P-201ENST00000418074 855 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXD12P35452 AC233981.1-201ENST00000423224 461 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 MTCO3P5-201ENST00000433620 714 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 RPL35AP21-201ENST00000437667 333 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 CBX1P1-201ENST00000440184 427 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXD12P35452 RPL23AP33-201ENST00000442301 452 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXD12P35452 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD12P35452 RPL30P6-201ENST00000475925 342 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 NCOR1P1-202ENST00000486162 291 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 RN7SL810P-201ENST00000493031 276 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 RPL36AP41-201ENST00000493820 306 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 AC025164.1-201ENST00000496249 478 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 SETP14-201ENST00000497538 873 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXD12P35452 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXD12P35452 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXD12P35452 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD12P35452 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXD12P35452 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXD12P35452 AP001189.2-201ENST00000527320 189 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXD12P35452 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.65□□□□□ -1.67
HOXD12P35452 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.67
HOXD12P35452 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXD12P35452 AL109618.2-201ENST00000605527 211 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 AC024941.1-201ENST00000612250 334 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 Z69908.1-201ENST00000622603 247 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD12P35452 AC091965.5-201ENST00000624785 342 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 FP325313.1-201ENST00000638228 703 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD12P35452 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD12P35452 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HOXD12P35452 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HOXD12P35452 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXD12P35452 MTND5P3-201ENST00000438536 1800 ntBASIC4.65□□□□□ -1.67
HOXD12P35452 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD12P35452 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXD12P35452 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.64□□□□□ -1.67
HOXD12P35452 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXD12P35452 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXD12P35452 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXD12P35452 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms