Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.15□□□□□ -1.59
HOXC12P31275 AC044860.2-201ENST00000561005 179 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXC12P31275 AC009852.2-201ENST00000567898 485 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 MIR4505-201ENST00000582238 73 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC12P31275 UBE2L4-201ENST00000587688 464 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC12P31275 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC12P31275 AC005261.5-201ENST00000596280 355 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 AL121757.2-201ENST00000611223 313 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC12P31275 RMST_3.1-201ENST00000611651 109 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 AL158801.5-201ENST00000623123 465 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC12P31275 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC12P31275 AC011460.1-201ENST00000636268 1834 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC12P31275 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC12P31275 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
HOXC12P31275 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
HOXC12P31275 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC12P31275 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC12P31275 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HOXC12P31275 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC12P31275 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC12P31275 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC12P31275 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC12P31275 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.14□□□□□ -1.59
HOXC12P31275 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC12P31275 Z95327.2-201ENST00000414579 1873 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC12P31275 AC091046.3-201ENST00000631455 1574 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HOXC12P31275 RNU6-451P-201ENST00000362921 107 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 RNU6-1097P-201ENST00000363586 107 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 U3.7-201ENST00000363668 216 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 RNU6-108P-201ENST00000365558 107 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 RPL23AP17-201ENST00000401064 499 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 RPL35AP24-201ENST00000413846 330 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AC004987.3-201ENST00000413879 771 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC12P31275 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC12P31275 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXC12P31275 AC137499.1-201ENST00000427602 88 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 RPS27P18-201ENST00000431701 247 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 OR52B5P-201ENST00000435337 951 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AC012075.1-201ENST00000436549 580 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC12P31275 AC006335.2-201ENST00000437993 330 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.14□□□□□ -1.59
HOXC12P31275 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXC12P31275 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC12P31275 GEMIN8P3-201ENST00000445417 720 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXC12P31275 AC010733.1-201ENST00000451515 401 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 MEMO1P4-201ENST00000453590 386 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 RPS20P21-201ENST00000466859 343 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC12P31275 AC108693.1-201ENST00000496068 432 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC12P31275 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC12P31275 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC12P31275 RNA5SP401-201ENST00000515920 127 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 RNU6-835P-201ENST00000516974 104 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AC090572.1-201ENST00000519251 160 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 PHBP17-201ENST00000528576 541 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 OR5BC1P-201ENST00000529327 739 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 HMGN2P36-201ENST00000529541 409 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 OR4R1P-201ENST00000529879 463 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC12P31275 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC12P31275 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.14□□□□□ -1.59
HOXC12P31275 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC12P31275 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC12P31275 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC12P31275 AC011712.1-201ENST00000588959 234 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC12P31275 AC010680.3-201ENST00000604215 520 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AC115621.1-201ENST00000604653 858 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC12P31275 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC12P31275 AC010133.1-201ENST00000615809 842 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AC037198.3-201ENST00000616754 526 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AC131238.1-201ENST00000617135 328 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AC006504.8-201ENST00000621046 635 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC12P31275 AC024940.5-201ENST00000622889 474 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AL356585.4-201ENST00000623078 1229 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AC112204.3-201ENST00000623822 332 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 AL159972.1-201ENST00000625150 448 ntBASIC5.14□□□□□ -1.59
HOXC12P31275 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC12P31275 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
HOXC12P31275 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC12P31275 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC12P31275 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC12P31275 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC12P31275 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC12P31275 ZNF680P1-201ENST00000436625 1469 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms