Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.09□□□□□ -1.75
HOXD10P28358 AP005205.1-201ENST00000563503 508 ntBASIC4.09□□□□□ -1.75
HOXD10P28358 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXD10P28358 MIR5680-201ENST00000577577 84 ntBASIC4.09□□□□□ -1.75
HOXD10P28358 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.09□□□□□ -1.75
HOXD10P28358 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXD10P28358 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXD10P28358 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXD10P28358 AC090425.2-201ENST00000608818 501 ntBASIC4.09□□□□□ -1.75
HOXD10P28358 AP003355.3-201ENST00000623465 114 ntBASIC4.09□□□□□ -1.75
HOXD10P28358 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXD10P28358 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HOXD10P28358 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.09□□□□□ -1.76
HOXD10P28358 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.09□□□□□ -1.76
HOXD10P28358 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HOXD10P28358 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HOXD10P28358 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.09□□□□□ -1.76
HOXD10P28358 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HOXD10P28358 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HOXD10P28358 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXD10P28358 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD10P28358 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
HOXD10P28358 RPL23AP57-201ENST00000332361 466 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 RNA5SP295-201ENST00000362655 121 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD10P28358 SNORD17-201ENST00000390930 237 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD10P28358 VN1R51P-201ENST00000411675 945 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXD10P28358 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD10P28358 CR848007.2-201ENST00000424918 787 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 ELOCP11-201ENST00000436690 332 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXD10P28358 MTND5P3-201ENST00000438536 1800 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 MTCYBP12-201ENST00000440559 1134 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 DDX6P1-205ENST00000441966 1436 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 ELOCP16-201ENST00000444494 332 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 AL157827.1-201ENST00000447622 132 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
HOXD10P28358 AP001992.1-205ENST00000462248 379 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 S100A11P2-201ENST00000467589 312 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXD10P28358 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.08□□□□□ -1.76
HOXD10P28358 AC093663.1-201ENST00000497190 394 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 HMGB1P3-201ENST00000502802 616 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 RN7SKP234-201ENST00000517173 224 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 AC024341.1-201ENST00000526444 1552 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 EIF4BP1-201ENST00000554881 351 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 AC124068.1-201ENST00000563131 678 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXD10P28358 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXD10P28358 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXD10P28358 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD10P28358 AC125494.3-201ENST00000602759 455 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 AL606834.2-201ENST00000602954 668 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 AC012467.1-201ENST00000607740 256 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 AL162274.2-201ENST00000614406 332 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 AC104307.1-201ENST00000616142 196 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 AC103858.2-201ENST00000621471 543 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 AC015726.3-201ENST00000624501 418 ntBASIC4.08□□□□□ -1.76
HOXD10P28358 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD10P28358 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD10P28358 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD10P28358 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD10P28358 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXD10P28358 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD10P28358 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HOXD10P28358 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD10P28358 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD10P28358 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD10P28358 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD10P28358 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD10P28358 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HOXD10P28358 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD10P28358 SNORA70E-201ENST00000384492 135 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD10P28358 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXD10P28358 EIF5P1-201ENST00000400019 1231 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 AC004987.3-201ENST00000413879 771 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXD10P28358 USP9YP36-201ENST00000424581 829 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 AC023347.2-201ENST00000433994 462 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXD10P28358 AC096638.2-201ENST00000434965 711 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 AC091862.1-201ENST00000438016 1100 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXD10P28358 XKRY2-201ENST00000442362 1093 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 HMGB3P8-201ENST00000449709 577 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 RPL27AP5-201ENST00000469428 449 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 AC090543.1-201ENST00000492168 485 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 AC108157.1-201ENST00000510511 539 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXD10P28358 PHBP14-201ENST00000512887 367 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 RNA5SP208-201ENST00000516156 78 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 IGLV3-26-201ENST00000520756 302 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXD10P28358 AC008011.1-201ENST00000545989 227 ntBASIC4.07□□□□□ -1.76
HOXD10P28358 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXD10P28358 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXD10P28358 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms