Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PCNAP1-201ENST00000505363 709 ntBASIC2.83□□□□□ -1.96
COL8A2P25067 APOOP4-201ENST00000513530 597 ntBASIC2.83□□□□□ -1.96
COL8A2P25067 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.83□□□□□ -1.96
COL8A2P25067 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.83□□□□□ -1.96
COL8A2P25067 AP003168.1-201ENST00000530091 307 ntBASIC2.83□□□□□ -1.96
COL8A2P25067 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.83□□□□□ -1.96
COL8A2P25067 AC008083.2-201ENST00000546707 476 ntBASIC2.83□□□□□ -1.96
COL8A2P25067 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.83□□□□□ -1.96
COL8A2P25067 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.83□□□□□ -1.96
COL8A2P25067 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.83□□□□□ -1.96
COL8A2P25067 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.83□□□□□ -1.96
COL8A2P25067 AL606834.2-201ENST00000602954 668 ntBASIC2.83□□□□□ -1.96
COL8A2P25067 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.83□□□□□ -1.96
COL8A2P25067 RMST_8.1-201ENST00000610287 165 ntBASIC2.83□□□□□ -1.96
COL8A2P25067 AL162574.2-201ENST00000614618 657 ntBASIC2.83□□□□□ -1.96
COL8A2P25067 AC139769.3-201ENST00000618383 175 ntBASIC2.83□□□□□ -1.96
COL8A2P25067 AP001002.2-201ENST00000625137 386 ntBASIC2.83□□□□□ -1.96
COL8A2P25067 AC091948.2-201ENST00000636510 279 ntBASIC2.83□□□□□ -1.96
COL8A2P25067 AL359715.4-201ENST00000606629 1436 ntBASIC2.83□□□□□ -1.96
COL8A2P25067 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL8A2P25067 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.83□□□□□ -1.96
COL8A2P25067 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
COL8A2P25067 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL8A2P25067 U3.15-201ENST00000365398 212 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL8A2P25067 MIR483-201ENST00000385070 76 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 U3.19-201ENST00000390893 196 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 HMGB3P18-201ENST00000406327 590 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.82□□□□□ -1.96
COL8A2P25067 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.82□□□□□ -1.96
COL8A2P25067 AC063979.1-201ENST00000415539 377 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 CR848007.2-201ENST00000424918 787 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 RNF19BPX-201ENST00000426224 625 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 Z75741.1-201ENST00000446793 314 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.82□□□□□ -1.96
COL8A2P25067 snoU13.24-201ENST00000458998 104 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.82□□□□□ -1.96
COL8A2P25067 RPL21P13-201ENST00000488305 481 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 RPL7P38-201ENST00000488396 739 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 AC112198.1-201ENST00000505369 1220 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.82□□□□□ -1.96
COL8A2P25067 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.82□□□□□ -1.96
COL8A2P25067 ARL2BPP6-201ENST00000512757 439 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 SNORA74D-201ENST00000516404 141 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 RN7SKP60-201ENST00000516985 239 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.82□□□□□ -1.96
COL8A2P25067 MTND2P7-201ENST00000521337 640 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 AC011602.1-201ENST00000546484 331 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.82□□□□□ -1.96
COL8A2P25067 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.82□□□□□ -1.96
COL8A2P25067 AL731537.2-201ENST00000561565 951 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.82□□□□□ -1.96
COL8A2P25067 MIR5680-201ENST00000577577 84 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.82□□□□□ -1.96
COL8A2P25067 AL365503.1-201ENST00000605247 905 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 YPEL5P2-201ENST00000605553 359 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.82□□□□□ -1.96
COL8A2P25067 AC116563.2-201ENST00000624751 535 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 HPVC1-201ENST00000629899 1198 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
COL8A2P25067 U6.98-201ENST00000637157 84 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.82□□□□□ -1.96
COL8A2P25067 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL8A2P25067 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
COL8A2P25067 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
COL8A2P25067 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
COL8A2P25067 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL8A2P25067 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL8A2P25067 AL513302.2-201ENST00000562313 1842 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.82□□□□□ -1.96
COL8A2P25067 AC058791.1-201ENST00000608412 3198 ntBASIC2.82□□□□□ -1.96
COL8A2P25067 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.81□□□□□ -1.96
COL8A2P25067 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
COL8A2P25067 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
COL8A2P25067 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.81□□□□□ -1.96
COL8A2P25067 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL8A2P25067 TAF9BP1-201ENST00000396646 746 ntBASIC2.81□□□□□ -1.96
COL8A2P25067 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.81□□□□□ -1.96
COL8A2P25067 AL158071.1-201ENST00000430315 461 ntBASIC2.81□□□□□ -1.96
COL8A2P25067 USP9YP31-201ENST00000431405 881 ntBASIC2.81□□□□□ -1.96
COL8A2P25067 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.81□□□□□ -1.96
COL8A2P25067 MRPS33P4-201ENST00000434892 317 ntBASIC2.81□□□□□ -1.96
COL8A2P25067 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.81□□□□□ -1.96
COL8A2P25067 MTCYBP12-201ENST00000440559 1134 ntBASIC2.81□□□□□ -1.96
COL8A2P25067 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.81□□□□□ -1.96
COL8A2P25067 AL157827.1-201ENST00000447622 132 ntBASIC2.81□□□□□ -1.96
COL8A2P25067 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
COL8A2P25067 AL500527.1-201ENST00000448532 255 ntBASIC2.81□□□□□ -1.96
COL8A2P25067 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.81□□□□□ -1.96
COL8A2P25067 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.81□□□□□ -1.96
COL8A2P25067 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.81□□□□□ -1.96
COL8A2P25067 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.81□□□□□ -1.96
COL8A2P25067 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.81□□□□□ -1.96
COL8A2P25067 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.81□□□□□ -1.96
COL8A2P25067 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.81□□□□□ -1.96
COL8A2P25067 AC010285.3-201ENST00000511668 676 ntBASIC2.81□□□□□ -1.96
COL8A2P25067 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.81□□□□□ -1.96
COL8A2P25067 SNORD116-26-201ENST00000516006 96 ntBASIC2.81□□□□□ -1.96
COL8A2P25067 RNU6-491P-201ENST00000516099 110 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms