Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 FAM92A1P1-201ENST00000528023 890 ntBASIC6.18□□□□□ -1.42
ERCC3P19447 AP003497.1-201ENST00000528472 562 ntBASIC6.18□□□□□ -1.42
ERCC3P19447 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC3P19447 RPS3AP4-201ENST00000555161 764 ntBASIC6.18□□□□□ -1.42
ERCC3P19447 MIR4458-201ENST00000578872 75 ntBASIC6.18□□□□□ -1.42
ERCC3P19447 AC067852.4-201ENST00000590314 478 ntBASIC6.18□□□□□ -1.42
ERCC3P19447 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC6.18□□□□□ -1.42
ERCC3P19447 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC6.18□□□□□ -1.42
ERCC3P19447 AL451044.1-201ENST00000604867 238 ntBASIC6.18□□□□□ -1.42
ERCC3P19447 AL590282.1-201ENST00000610379 1136 ntBASIC6.18□□□□□ -1.42
ERCC3P19447 AL596245.1-201ENST00000618994 362 ntBASIC6.18□□□□□ -1.42
ERCC3P19447 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.18□□□□□ -1.42
ERCC3P19447 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
ERCC3P19447 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC3P19447 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
ERCC3P19447 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
ERCC3P19447 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC3P19447 OR4F13P-202ENST00000560066 2054 ntBASIC6.18□□□□□ -1.42
ERCC3P19447 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC3P19447 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC3P19447 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC3P19447 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
ERCC3P19447 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
ERCC3P19447 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
ERCC3P19447 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
ERCC3P19447 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC3P19447 AC008033.1-201ENST00000216407 1162 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC3P19447 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC3P19447 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.17□□□□□ -1.42
ERCC3P19447 Y_RNA.493-201ENST00000384422 102 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC3P19447 AC069157.1-201ENST00000421749 137 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC6.17□□□□□ -1.42
ERCC3P19447 AC019097.1-201ENST00000424783 735 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 AC104837.2-201ENST00000427236 424 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 RBMY2QP-201ENST00000429799 1147 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 AC073464.1-201ENST00000429823 534 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 AC104850.1-201ENST00000435940 476 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.17□□□□□ -1.42
ERCC3P19447 PRPF38AP1-201ENST00000451976 933 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 C1DP4-201ENST00000455429 424 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 GYG1P1-201ENST00000460864 698 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC3P19447 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.17□□□□□ -1.42
ERCC3P19447 ARL2BPP6-201ENST00000512757 439 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 HIGD1AP3-201ENST00000515857 278 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 RNU6-27P-201ENST00000516146 107 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 RN7SKP234-201ENST00000517173 224 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC6.17□□□□□ -1.42
ERCC3P19447 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.17□□□□□ -1.42
ERCC3P19447 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.17□□□□□ -1.42
ERCC3P19447 AC092490.3-201ENST00000545370 572 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 GSTP1P1-201ENST00000548078 319 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC3P19447 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC3P19447 AL845331.3-202ENST00000562856 261 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC3P19447 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.17□□□□□ -1.42
ERCC3P19447 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.17□□□□□ -1.42
ERCC3P19447 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.17□□□□□ -1.42
ERCC3P19447 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC3P19447 AC068790.3-201ENST00000602988 553 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 AP002360.4-201ENST00000606980 481 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 AL590099.1-201ENST00000615276 138 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 AC007014.2-201ENST00000615581 479 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC3P19447 AC079597.1-201ENST00000624306 508 ntBASIC6.17□□□□□ -1.42
ERCC3P19447 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC3P19447 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC3P19447 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC3P19447 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC3P19447 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC3P19447 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC3P19447 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC3P19447 AC104260.2-201ENST00000623551 3497 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
ERCC3P19447 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC3P19447 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
ERCC3P19447 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC3P19447 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC3P19447 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
ERCC3P19447 Y_RNA.9-201ENST00000362354 101 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
ERCC3P19447 U3.20-201ENST00000390909 217 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.16□□□□□ -1.42
ERCC3P19447 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.16□□□□□ -1.42
ERCC3P19447 AC079809.1-201ENST00000415468 276 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.16□□□□□ -1.42
ERCC3P19447 AC127526.1-201ENST00000417526 366 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.16□□□□□ -1.42
ERCC3P19447 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.16□□□□□ -1.42
ERCC3P19447 FABP7P2-201ENST00000429946 379 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 MTND1P2-201ENST00000430604 821 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC3P19447 AC002486.1-201ENST00000435098 391 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 H2AFZP6-201ENST00000444403 394 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 AC079448.1-201ENST00000449377 373 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.16□□□□□ -1.42
ERCC3P19447 ABCC13-202ENST00000463099 3842 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms