Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 HSPA8P13-201ENST00000523715 472 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 CYCSP28-201ENST00000534284 321 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 HSPE1P3-201ENST00000559254 309 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 AL355802.3-201ENST00000607571 545 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 AL158196.1-201ENST00000616786 434 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 AC073869.8-201ENST00000641806 335 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 XPOTP1-201ENST00000443317 2398 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 OR11H4-201ENST00000315409 1082 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 MT-TR-201ENST00000387439 65 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 MIR1305-201ENST00000408300 86 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 RN7SKP266-201ENST00000410232 287 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 RNU6-195P-201ENST00000411352 109 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 BX890604.2-201ENST00000427883 474 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AC002486.1-201ENST00000435098 391 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 BX842559.2-201ENST00000451418 605 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 KCTD9P5-201ENST00000504141 1170 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AC012400.1-201ENST00000518452 381 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 RN7SL356P-201ENST00000582228 248 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 MIR4697-201ENST00000582977 78 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 MAGOH2P-202ENST00000584384 429 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AL391646.1-201ENST00000603860 190 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AL031320.1-201ENST00000604177 357 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AC018695.5-201ENST00000605872 315 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 RMST_3.1-201ENST00000611651 109 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AC139792.3-201ENST00000623525 224 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AC110994.2-201ENST00000635481 492 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 MIR1302-1-201ENST00000637932 143 ntBASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CSB-PGBD3P0DP91 AC066616.2-201ENST00000559334 1481 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 MIR649-201ENST00000384843 97 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 AL049693.1-201ENST00000402760 611 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 COX6CP17-201ENST00000421389 185 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 AC009961.2-201ENST00000435771 251 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 BX679664.2-201ENST00000439282 283 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 RPL23AP16-201ENST00000441715 421 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 MTND6P13-201ENST00000443510 523 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 AL121877.1-201ENST00000453704 622 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 AC026410.2-201ENST00000460281 156 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 RN7SL459P-201ENST00000481078 302 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 RAB9BP1-201ENST00000519581 626 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 AC008033.2-201ENST00000542626 177 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 AC011611.1-201ENST00000552179 197 ntBASIC7.04□□□□□ -1.28
CSB-PGBD3P0DP91 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms