Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNU1-64P-201ENST00000365443 163 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SEMA3DO95025 RN7SKP111-201ENST00000410349 271 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.34□□□□□ -1.87
SEMA3DO95025 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.34□□□□□ -1.87
SEMA3DO95025 AL662791.1-201ENST00000441992 928 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.34□□□□□ -1.87
SEMA3DO95025 AC006539.3-201ENST00000454258 129 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 RPL21P104-201ENST00000464143 478 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 RN7SL442P-201ENST00000473804 320 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 ACTR3P3-201ENST00000480448 893 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.34□□□□□ -1.87
SEMA3DO95025 AP000563.1-201ENST00000490865 758 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.34□□□□□ -1.87
SEMA3DO95025 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.34□□□□□ -1.87
SEMA3DO95025 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.34□□□□□ -1.87
SEMA3DO95025 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.34□□□□□ -1.87
SEMA3DO95025 MTND4LP31-201ENST00000514859 294 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 RNU1-95P-201ENST00000516357 160 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 RNU1-128P-201ENST00000516704 160 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 PAICSP4-201ENST00000517543 1253 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.34□□□□□ -1.87
SEMA3DO95025 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.34□□□□□ -1.87
SEMA3DO95025 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.34□□□□□ -1.87
SEMA3DO95025 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.34□□□□□ -1.87
SEMA3DO95025 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.34□□□□□ -1.87
SEMA3DO95025 AL121594.4-201ENST00000556211 1196 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 TGIF1P1-201ENST00000558095 802 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.34□□□□□ -1.87
SEMA3DO95025 AC106785.1-201ENST00000565935 262 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.34□□□□□ -1.87
SEMA3DO95025 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.34□□□□□ -1.87
SEMA3DO95025 AL121772.2-201ENST00000614331 297 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SEMA3DO95025 AL162233.1-201ENST00000620014 944 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.34□□□□□ -1.88
SEMA3DO95025 SRP72P2-201ENST00000344851 1979 ntBASIC3.34□□□□□ -1.88
SEMA3DO95025 GTF2H2B-203ENST00000508065 1432 ntBASIC3.34□□□□□ -1.88
SEMA3DO95025 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SEMA3DO95025 AL136164.4-201ENST00000625013 2135 ntBASIC3.34□□□□□ -1.88
SEMA3DO95025 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
SEMA3DO95025 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SEMA3DO95025 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEMA3DO95025 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SEMA3DO95025 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.33□□□□□ -1.88
SEMA3DO95025 FRG1CP-201ENST00000358464 769 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 SNORA51.2-201ENST00000364595 132 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEMA3DO95025 HMGB3P18-201ENST00000406327 590 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 RPL23AP47-201ENST00000408017 460 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
SEMA3DO95025 RN7SKP202-201ENST00000410439 330 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.33□□□□□ -1.88
SEMA3DO95025 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.33□□□□□ -1.88
SEMA3DO95025 MTCO3P4-201ENST00000419236 787 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 AP000907.1-201ENST00000428428 510 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 RPS24P8-201ENST00000431490 402 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 MTND4LP7-201ENST00000431728 294 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.33□□□□□ -1.88
SEMA3DO95025 AC105402.2-201ENST00000438503 358 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.33□□□□□ -1.88
SEMA3DO95025 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.33□□□□□ -1.88
SEMA3DO95025 U3.44-201ENST00000458938 192 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 RPL23AP67-201ENST00000465341 474 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 OR9N1P-202ENST00000494289 481 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 AC020893.1-201ENST00000502452 580 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.33□□□□□ -1.88
SEMA3DO95025 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.33□□□□□ -1.88
SEMA3DO95025 SNORA70.18-201ENST00000516696 98 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.33□□□□□ -1.88
SEMA3DO95025 AP001636.2-201ENST00000525517 696 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.33□□□□□ -1.88
SEMA3DO95025 AC009948.4-201ENST00000604692 675 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 AC016877.3-201ENST00000606778 504 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 AC006023.2-201ENST00000609916 167 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.33□□□□□ -1.88
SEMA3DO95025 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.33□□□□□ -1.88
SEMA3DO95025 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEMA3DO95025 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEMA3DO95025 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEMA3DO95025 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.33□□□□□ -1.88
SEMA3DO95025 ZNF285B-201ENST00000561698 1767 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 AL513302.2-201ENST00000562313 1842 ntBASIC3.33□□□□□ -1.88
SEMA3DO95025 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
SEMA3DO95025 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SEMA3DO95025 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SEMA3DO95025 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SEMA3DO95025 AC116096.1-201ENST00000566804 2314 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SEMA3DO95025 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SEMA3DO95025 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SEMA3DO95025 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.32□□□□□ -1.88
SEMA3DO95025 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SEMA3DO95025 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SEMA3DO95025 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SEMA3DO95025 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SEMA3DO95025 SNORA5A-201ENST00000384111 134 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 RNU4-31P-201ENST00000384211 141 ntBASIC3.32□□□□□ -1.88
SEMA3DO95025 RNA5SP293-201ENST00000410527 113 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms