Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF40O75150 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF40O75150 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF40O75150 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF40O75150 BDP1P-201ENST00000582658 1990 ntBASIC6.97□□□□□ -1.29
RNF40O75150 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF40O75150 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF40O75150 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF40O75150 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF40O75150 RNA5SP188-201ENST00000362916 129 ntBASIC6.97□□□□□ -1.29
RNF40O75150 RNA5SP514-201ENST00000363717 111 ntBASIC6.97□□□□□ -1.29
RNF40O75150 RN7SKP237-201ENST00000364663 301 ntBASIC6.97□□□□□ -1.29
RNF40O75150 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.97□□□□□ -1.29
RNF40O75150 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
RNF40O75150 RPL12P23-201ENST00000405880 490 ntBASIC6.97□□□□□ -1.29
RNF40O75150 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF40O75150 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF40O75150 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.97□□□□□ -1.29
RNF40O75150 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF40O75150 CRYGGP-201ENST00000443337 145 ntBASIC6.97□□□□□ -1.29
RNF40O75150 NDUFB1P2-201ENST00000449477 176 ntBASIC6.97□□□□□ -1.29
RNF40O75150 AC108059.3-201ENST00000456388 214 ntBASIC6.97□□□□□ -1.29
RNF40O75150 AC087879.1-201ENST00000474343 374 ntBASIC6.97□□□□□ -1.29
RNF40O75150 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF40O75150 AC092824.1-201ENST00000483524 576 ntBASIC6.97□□□□□ -1.29
RNF40O75150 AP002812.1-201ENST00000495378 474 ntBASIC6.97□□□□□ -1.29
RNF40O75150 RNU2-10P-201ENST00000516375 211 ntBASIC6.97□□□□□ -1.29
RNF40O75150 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF40O75150 AC007068.2-201ENST00000543168 395 ntBASIC6.97□□□□□ -1.29
RNF40O75150 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF40O75150 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF40O75150 AC004232.1-201ENST00000571388 208 ntBASIC6.97□□□□□ -1.29
RNF40O75150 AC005899.2-201ENST00000584353 90 ntBASIC6.97□□□□□ -1.29
RNF40O75150 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF40O75150 RNF138P2-201ENST00000603490 592 ntBASIC6.97□□□□□ -1.29
RNF40O75150 AL021918.2-201ENST00000613415 194 ntBASIC6.97□□□□□ -1.29
RNF40O75150 AC022467.1-201ENST00000614738 749 ntBASIC6.97□□□□□ -1.29
RNF40O75150 AC011369.2-201ENST00000624423 1567 ntBASIC6.97□□□□□ -1.29
RNF40O75150 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
RNF40O75150 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF40O75150 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF40O75150 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF40O75150 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF40O75150 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
RNF40O75150 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF40O75150 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF40O75150 AC110373.1-201ENST00000505994 3505 ntBASIC6.97□□□□□ -1.29
RNF40O75150 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF40O75150 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF40O75150 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
RNF40O75150 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.96□□□□□ -1.29
RNF40O75150 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.96□□□□□ -1.29
RNF40O75150 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.29
RNF40O75150 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
RNF40O75150 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
RNF40O75150 SNORD8-201ENST00000363915 110 ntBASIC6.96□□□□□ -1.3
RNF40O75150 SNORD27-201ENST00000363981 72 ntBASIC6.96□□□□□ -1.3
RNF40O75150 SNORA24.1-201ENST00000384401 135 ntBASIC6.96□□□□□ -1.3
RNF40O75150 Y_RNA.551-201ENST00000384661 102 ntBASIC6.96□□□□□ -1.3
RNF40O75150 RNU6-550P-201ENST00000391057 101 ntBASIC6.96□□□□□ -1.3
RNF40O75150 UBBP1-201ENST00000392399 473 ntBASIC6.96□□□□□ -1.3
RNF40O75150 MIR1282-201ENST00000408865 101 ntBASIC6.96□□□□□ -1.3
RNF40O75150 RNA5SP36-201ENST00000410197 133 ntBASIC6.96□□□□□ -1.3
RNF40O75150 RN7SKP126-201ENST00000411143 300 ntBASIC6.96□□□□□ -1.3
RNF40O75150 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF40O75150 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF40O75150 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF40O75150 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF40O75150 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF40O75150 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF40O75150 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF40O75150 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF40O75150 AL139109.1-201ENST00000455491 297 ntBASIC6.96□□□□□ -1.3
RNF40O75150 AC245028.2-201ENST00000458673 253 ntBASIC6.96□□□□□ -1.3
RNF40O75150 TRBVB-201ENST00000477100 408 ntBASIC6.96□□□□□ -1.3
RNF40O75150 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF40O75150 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF40O75150 SNX18P23-201ENST00000510867 677 ntBASIC6.96□□□□□ -1.3
RNF40O75150 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF40O75150 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF40O75150 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF40O75150 AP005639.1-201ENST00000526939 192 ntBASIC6.96□□□□□ -1.3
RNF40O75150 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF40O75150 SARNP-203ENST00000552080 726 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF40O75150 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF40O75150 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF40O75150 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF40O75150 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF40O75150 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC6.96□□□□□ -1.3
RNF40O75150 AC020914.7-201ENST00000594477 545 ntBASIC6.96□□□□□ -1.3
RNF40O75150 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF40O75150 AC006557.5-201ENST00000603126 811 ntBASIC6.96□□□□□ -1.3
RNF40O75150 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF40O75150 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.96□□□□□ -1.3
RNF40O75150 AC061999.1-201ENST00000624454 177 ntBASIC6.96□□□□□ -1.3
RNF40O75150 AP000843.1-201ENST00000624880 701 ntBASIC6.96□□□□□ -1.3
RNF40O75150 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF40O75150 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.96□□□□□ -1.3
RNF40O75150 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF40O75150 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms