Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.86□□□□□ -1.79
LMX1BO60663 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.86□□□□□ -1.79
LMX1BO60663 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.86□□□□□ -1.79
LMX1BO60663 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LMX1BO60663 AC025674.1-201ENST00000507074 324 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AC008885.2-201ENST00000509506 930 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AC091965.2-201ENST00000512324 613 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.86□□□□□ -1.79
LMX1BO60663 MIR2116-201ENST00000517221 80 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.86□□□□□ -1.79
LMX1BO60663 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.86□□□□□ -1.79
LMX1BO60663 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.86□□□□□ -1.79
LMX1BO60663 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.86□□□□□ -1.79
LMX1BO60663 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
LMX1BO60663 MTND6P33-201ENST00000571794 183 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.86□□□□□ -1.79
LMX1BO60663 BNIP3P33-201ENST00000598912 569 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.86□□□□□ -1.79
LMX1BO60663 VN1R85P-201ENST00000601587 426 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AC009220.3-201ENST00000604318 586 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AL008729.2-201ENST00000606393 473 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AC090948.1-201ENST00000607464 549 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.86□□□□□ -1.79
LMX1BO60663 AP004247.3-201ENST00000608682 624 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AC055764.2-201ENST00000610089 670 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AC024941.1-201ENST00000612250 334 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LMX1BO60663 AL136981.2-201ENST00000617319 734 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AC099842.1-201ENST00000619919 596 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LMX1BO60663 AL359740.1-201ENST00000624340 592 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.86□□□□□ -1.79
LMX1BO60663 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.86□□□□□ -1.79
LMX1BO60663 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.86□□□□□ -1.79
LMX1BO60663 AL596275.2-204ENST00000641628 552 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 AL596275.2-206ENST00000641957 626 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LMX1BO60663 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.86□□□□□ -1.79
LMX1BO60663 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LMX1BO60663 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LMX1BO60663 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.86□□□□□ -1.79
LMX1BO60663 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.86□□□□□ -1.79
LMX1BO60663 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LMX1BO60663 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
LMX1BO60663 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LMX1BO60663 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.85□□□□□ -1.79
LMX1BO60663 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LMX1BO60663 HMGB1P5-201ENST00000255320 642 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LMX1BO60663 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
LMX1BO60663 RNU6-839P-201ENST00000363347 108 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 RNU1-85P-201ENST00000364127 164 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 Y_RNA.311-201ENST00000365068 96 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 SNORA70C-201ENST00000384538 135 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 AL136131.1-201ENST00000406079 803 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 TPMTP3-201ENST00000411928 735 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 UBE2V1P10-201ENST00000414685 269 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 AC062016.2-201ENST00000420950 676 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 MTCO2P34-201ENST00000421994 607 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 DPRXP1-201ENST00000426312 460 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.85□□□□□ -1.79
LMX1BO60663 AC011998.1-201ENST00000433403 117 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.85□□□□□ -1.79
LMX1BO60663 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.85□□□□□ -1.79
LMX1BO60663 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.85□□□□□ -1.79
LMX1BO60663 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.85□□□□□ -1.79
LMX1BO60663 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.85□□□□□ -1.79
LMX1BO60663 NPM1P39-201ENST00000449818 867 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 KATNBL1P6-201ENST00000453433 915 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.85□□□□□ -1.79
LMX1BO60663 RN7SL303P-201ENST00000469773 251 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 AC011825.1-201ENST00000484967 388 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 RPS27P23-201ENST00000487608 251 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.85□□□□□ -1.79
LMX1BO60663 AC111193.1-201ENST00000504097 155 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LMX1BO60663 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.85□□□□□ -1.79
LMX1BO60663 SNORA31.9-201ENST00000516429 84 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 RNU6-678P-201ENST00000516832 109 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LMX1BO60663 AC134698.4-201ENST00000523451 826 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.85□□□□□ -1.79
LMX1BO60663 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.85□□□□□ -1.79
LMX1BO60663 OR7K1P-201ENST00000546439 926 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 OR6C7P-201ENST00000547875 934 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 AC004217.3-201ENST00000551552 878 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LMX1BO60663 AC007954.1-201ENST00000554198 494 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.85□□□□□ -1.79
LMX1BO60663 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.85□□□□□ -1.79
LMX1BO60663 AC068831.4-201ENST00000556118 109 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 NPM1P47-201ENST00000560843 856 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 AL121834.1-201ENST00000572284 509 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 BPTFP1-201ENST00000579209 492 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.85□□□□□ -1.79
LMX1BO60663 AP003465.2-201ENST00000602571 373 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 AC073648.5-201ENST00000603502 305 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 AL136363.2-201ENST00000604173 851 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 AC112220.3-201ENST00000605502 502 ntBASIC3.85□□□□□ -1.79
LMX1BO60663 AL391497.1-201ENST00000608671 547 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms