Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXA2O43364 Y_RNA.117-201ENST00000363294 101 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HOXA2O43364 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXA2O43364 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.78□□□□□ -1.32
HOXA2O43364 RNU6-1226P-201ENST00000384317 107 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 RNU6-550P-201ENST00000391057 101 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.78□□□□□ -1.32
HOXA2O43364 GJA6P-201ENST00000415117 1042 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 AC114491.1-201ENST00000416095 246 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXA2O43364 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.78□□□□□ -1.32
HOXA2O43364 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXA2O43364 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.78□□□□□ -1.32
HOXA2O43364 CALM2P2-201ENST00000428512 440 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXA2O43364 AL161722.2-201ENST00000434731 981 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 AC023141.3-201ENST00000436698 278 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 OSTCP8-201ENST00000445117 448 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 RPS15AP27-201ENST00000449183 343 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC6.78□□□□□ -1.32
HOXA2O43364 SETP20-201ENST00000457046 852 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 AC116533.1-201ENST00000459748 321 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 RPL21P6-201ENST00000479171 504 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 AC022493.2-201ENST00000506122 481 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 SLC25A15P5-201ENST00000508033 253 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 RNA5SP271-201ENST00000516700 88 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 RNU6-307P-201ENST00000516743 106 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 RNU6-798P-201ENST00000516912 103 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.78□□□□□ -1.32
HOXA2O43364 AC012400.1-201ENST00000518452 381 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.78□□□□□ -1.32
HOXA2O43364 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXA2O43364 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXA2O43364 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.78□□□□□ -1.32
HOXA2O43364 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.78□□□□□ -1.32
HOXA2O43364 RPA2P1-201ENST00000556557 721 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.78□□□□□ -1.32
HOXA2O43364 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.78□□□□□ -1.32
HOXA2O43364 MIR3941-201ENST00000582572 103 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 AL021918.2-201ENST00000613415 194 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 AC141273.2-201ENST00000618989 130 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXA2O43364 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
HOXA2O43364 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXA2O43364 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXA2O43364 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXA2O43364 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXA2O43364 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.78□□□□□ -1.32
HOXA2O43364 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXA2O43364 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HOXA2O43364 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.78□□□□□ -1.32
HOXA2O43364 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HOXA2O43364 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.78□□□□□ -1.32
HOXA2O43364 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
HOXA2O43364 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXA2O43364 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXA2O43364 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXA2O43364 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXA2O43364 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.77□□□□□ -1.33
HOXA2O43364 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXA2O43364 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXA2O43364 RNU1-134P-201ENST00000362935 165 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 RNA5SP510-201ENST00000364697 99 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 RNU5E-6P-201ENST00000365574 115 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 Y_RNA.424-201ENST00000384063 103 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 DBIP1-201ENST00000401435 260 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 MIR548M-201ENST00000408260 86 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 RNA5SP156-201ENST00000410250 110 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 RPL30P2-201ENST00000414021 291 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.77□□□□□ -1.33
HOXA2O43364 USMG5P1-201ENST00000425964 177 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXA2O43364 SNORD121B-201ENST00000458838 81 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 ACA64.1-201ENST00000459171 127 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXA2O43364 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXA2O43364 RN7SKP238-201ENST00000516483 249 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXA2O43364 AC131281.1-201ENST00000522984 164 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 AC022616.4-201ENST00000522985 181 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 AC124068.1-201ENST00000563131 678 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXA2O43364 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXA2O43364 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXA2O43364 U2.17-201ENST00000611454 95 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 AL021879.1-201ENST00000611756 288 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 AC137590.2-201ENST00000619709 240 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 AC069234.4-201ENST00000621276 412 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXA2O43364 AC025809.2-201ENST00000625085 1802 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXA2O43364 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXA2O43364 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXA2O43364 AC091812.1-201ENST00000432235 1948 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
HOXA2O43364 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HOXA2O43364 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXA2O43364 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms