Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.42□□□□□ -1.54
CUX2O14529 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.42□□□□□ -1.54
CUX2O14529 TRAV37-201ENST00000553906 342 ntBASIC5.42□□□□□ -1.54
CUX2O14529 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.42□□□□□ -1.54
CUX2O14529 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CUX2O14529 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CUX2O14529 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC5.42□□□□□ -1.54
CUX2O14529 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CUX2O14529 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
CUX2O14529 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.41□□□□□ -1.54
CUX2O14529 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.41□□□□□ -1.54
CUX2O14529 RPS3AP50-201ENST00000487064 803 ntBASIC5.41□□□□□ -1.54
CUX2O14529 AP001960.1-201ENST00000506494 658 ntBASIC5.41□□□□□ -1.54
CUX2O14529 CYP2C60P-201ENST00000566088 139 ntBASIC5.41□□□□□ -1.54
CUX2O14529 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.41□□□□□ -1.54
CUX2O14529 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.41□□□□□ -1.54
CUX2O14529 SNORD39.4-201ENST00000620099 78 ntBASIC5.41□□□□□ -1.54
CUX2O14529 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CUX2O14529 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CUX2O14529 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CUX2O14529 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CUX2O14529 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CUX2O14529 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CUX2O14529 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CUX2O14529 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
CUX2O14529 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
CUX2O14529 Y_RNA.118-201ENST00000363300 101 ntBASIC5.4□□□□□ -1.54
CUX2O14529 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CUX2O14529 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.4□□□□□ -1.54
CUX2O14529 ELOCP23-201ENST00000452014 332 ntBASIC5.4□□□□□ -1.54
CUX2O14529 DNAJC19P1-201ENST00000455312 319 ntBASIC5.4□□□□□ -1.54
CUX2O14529 RPS3P1-201ENST00000456781 192 ntBASIC5.4□□□□□ -1.54
CUX2O14529 MTCO3P42-201ENST00000509488 518 ntBASIC5.4□□□□□ -1.54
CUX2O14529 MTCO3P39-201ENST00000514812 518 ntBASIC5.4□□□□□ -1.54
CUX2O14529 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.4□□□□□ -1.54
CUX2O14529 AC234778.2-201ENST00000566241 354 ntBASIC5.4□□□□□ -1.54
CUX2O14529 AC141257.3-201ENST00000572906 215 ntBASIC5.4□□□□□ -1.54
CUX2O14529 AC010615.3-201ENST00000597319 394 ntBASIC5.4□□□□□ -1.54
CUX2O14529 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.4□□□□□ -1.55
CUX2O14529 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CUX2O14529 AC096644.4-201ENST00000563417 2912 ntBASIC5.4□□□□□ -1.55
CUX2O14529 AC107027.3-201ENST00000565095 3473 ntBASIC5.39□□□□□ -1.55
CUX2O14529 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CUX2O14529 AL450338.1-201ENST00000407987 512 ntBASIC5.39□□□□□ -1.55
CUX2O14529 SNORA3.2-201ENST00000408221 125 ntBASIC5.39□□□□□ -1.55
CUX2O14529 AL355994.1-201ENST00000424379 260 ntBASIC5.39□□□□□ -1.55
CUX2O14529 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.39□□□□□ -1.55
CUX2O14529 HMGB3P12-201ENST00000438745 556 ntBASIC5.39□□□□□ -1.55
CUX2O14529 AC025181.1-201ENST00000477507 416 ntBASIC5.39□□□□□ -1.55
CUX2O14529 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.39□□□□□ -1.55
CUX2O14529 PCBP2P3-201ENST00000509726 843 ntBASIC5.39□□□□□ -1.55
CUX2O14529 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.39□□□□□ -1.55
CUX2O14529 AC034159.1-201ENST00000513885 583 ntBASIC5.39□□□□□ -1.55
CUX2O14529 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.39□□□□□ -1.55
CUX2O14529 AC015849.2-201ENST00000605738 409 ntBASIC5.39□□□□□ -1.55
CUX2O14529 AL451142.2-201ENST00000429076 2090 ntBASIC5.39□□□□□ -1.55
CUX2O14529 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CUX2O14529 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.39□□□□□ -1.55
CUX2O14529 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CUX2O14529 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CUX2O14529 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CUX2O14529 ADAM3A-203ENST00000461344 2157 ntBASIC5.39□□□□□ -1.55
CUX2O14529 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CUX2O14529 5S_rRNA.2-201ENST00000391293 112 ntBASIC5.39□□□□□ -1.55
CUX2O14529 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.39□□□□□ -1.55
CUX2O14529 RPS29P21-201ENST00000496272 170 ntBASIC5.39□□□□□ -1.55
CUX2O14529 AC083906.5-201ENST00000503722 328 ntBASIC5.39□□□□□ -1.55
CUX2O14529 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.39□□□□□ -1.55
CUX2O14529 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.39□□□□□ -1.55
CUX2O14529 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.39□□□□□ -1.55
CUX2O14529 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
CUX2O14529 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.39□□□□□ -1.55
CUX2O14529 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.39□□□□□ -1.55
CUX2O14529 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC5.39□□□□□ -1.55
CUX2O14529 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.39□□□□□ -1.55
CUX2O14529 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC5.39□□□□□ -1.55
CUX2O14529 AL356321.1-201ENST00000621360 228 ntBASIC5.39□□□□□ -1.55
CUX2O14529 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
CUX2O14529 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.38□□□□□ -1.55
CUX2O14529 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.38□□□□□ -1.55
CUX2O14529 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.38□□□□□ -1.55
CUX2O14529 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
CUX2O14529 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.38□□□□□ -1.55
CUX2O14529 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.38□□□□□ -1.55
CUX2O14529 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.38□□□□□ -1.55
CUX2O14529 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
CUX2O14529 AC078899.3-201ENST00000599065 212 ntBASIC5.38□□□□□ -1.55
CUX2O14529 AC016727.1-205ENST00000605437 569 ntBASIC5.38□□□□□ -1.55
CUX2O14529 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CUX2O14529 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CUX2O14529 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CUX2O14529 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CUX2O14529 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.37□□□□□ -1.55
CUX2O14529 GCNT6-201ENST00000379591 934 ntBASIC5.37□□□□□ -1.55
CUX2O14529 MIR34A-201ENST00000385130 110 ntBASIC5.37□□□□□ -1.55
CUX2O14529 AL136116.1-201ENST00000403591 381 ntBASIC5.37□□□□□ -1.55
CUX2O14529 MTND4LP12-201ENST00000448237 295 ntBASIC5.37□□□□□ -1.55
CUX2O14529 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.37□□□□□ -1.55
CUX2O14529 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.37□□□□□ -1.55
CUX2O14529 AC008126.1-201ENST00000549019 480 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms