Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
FOXN3O00409 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
FOXN3O00409 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
FOXN3O00409 AC018529.3-201ENST00000624212 2254 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 MAPK10-286ENST00000641208 8747 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXN3O00409 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.82□□□□□ -1.64
FOXN3O00409 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXN3O00409 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FOXN3O00409 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXN3O00409 DDX43P2-201ENST00000604753 1354 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 AC125257.1-201ENST00000560400 2930 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXN3O00409 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
FOXN3O00409 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.82□□□□□ -1.64
FOXN3O00409 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
FOXN3O00409 RNU6-660P-201ENST00000364566 109 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 SNORA70F-201ENST00000384142 135 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 RNA5SP372-201ENST00000390836 115 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 AC009237.10-201ENST00000414112 510 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXN3O00409 RPS12P10-201ENST00000427031 377 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXN3O00409 USP9YP9-201ENST00000429406 715 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 USP9YP28-201ENST00000435142 589 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 MTND2P4-201ENST00000445034 1004 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 EEF1E1P1-201ENST00000446998 430 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 SBDSP1-204ENST00000453858 737 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 AC005008.1-201ENST00000456151 612 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 MEMO1P3-201ENST00000459811 302 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 AC092754.2-201ENST00000463506 460 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.82□□□□□ -1.64
FOXN3O00409 AC108941.1-201ENST00000502853 530 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXN3O00409 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXN3O00409 AC090151.1-201ENST00000520784 730 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 OR4A45P-201ENST00000529954 901 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXN3O00409 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXN3O00409 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXN3O00409 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXN3O00409 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXN3O00409 MIR4637-201ENST00000582405 84 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXN3O00409 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXN3O00409 AL596327.1-201ENST00000603629 213 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 AC007566.2-201ENST00000603642 413 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 AL049539.1-201ENST00000611964 459 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 AC026585.1-201ENST00000619582 524 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 AL356266.1-201ENST00000623311 483 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 AL079343.1-201ENST00000572358 1771 ntBASIC4.82□□□□□ -1.64
FOXN3O00409 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
FOXN3O00409 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FOXN3O00409 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN3O00409 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN3O00409 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
FOXN3O00409 SAGE2P-201ENST00000420011 2126 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN3O00409 OR11H5P-202ENST00000641612 1325 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AC130650.2-201ENST00000618736 2403 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN3O00409 RN7SKP44-201ENST00000363602 316 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 SNORD113.2-201ENST00000364166 89 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 RNVU1-3-201ENST00000364313 161 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 Y_RNA.302-201ENST00000364997 102 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 Y_RNA.436-201ENST00000384097 102 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AL024474.1-201ENST00000404655 591 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXN3O00409 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXN3O00409 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.81□□□□□ -1.64
FOXN3O00409 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXN3O00409 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN3O00409 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.81□□□□□ -1.64
FOXN3O00409 RPL23AP25-201ENST00000430973 463 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 RPS6P12-201ENST00000432491 726 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 KCTD10P1-201ENST00000434203 625 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXN3O00409 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXN3O00409 AC118469.1-201ENST00000442943 488 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXN3O00409 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXN3O00409 ZNF114P1-201ENST00000453500 292 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXN3O00409 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXN3O00409 AC093767.1-201ENST00000504523 156 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXN3O00409 AC005178.1-201ENST00000508392 440 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AC002456.2-201ENST00000509356 380 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AC005798.1-201ENST00000513715 387 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AC117532.1-201ENST00000514638 323 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 IGLVIV-53-201ENST00000520107 367 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AP001781.1-201ENST00000530977 207 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 OR7K1P-201ENST00000546439 926 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AL121766.1-201ENST00000547436 487 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXN3O00409 AL161713.1-201ENST00000555538 145 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN3O00409 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXN3O00409 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms