Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CCDC188H7C350 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC188H7C350 SNORD116-12-201ENST00000384468 92 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 RNU11-4P-201ENST00000391149 133 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 MTCO1P56-201ENST00000401674 224 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 ZNF602P-201ENST00000405929 924 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 TPT1P2-201ENST00000413105 503 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 RPL30P2-201ENST00000414021 291 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 AL732292.1-201ENST00000426692 226 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 SEPT7P5-201ENST00000434048 306 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC188H7C350 CBX1P1-201ENST00000440184 427 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 AL138878.2-201ENST00000440581 1241 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 HMGB3P6-201ENST00000444896 598 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC188H7C350 RPS11P1-201ENST00000451072 473 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC188H7C350 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC188H7C350 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC188H7C350 AC104164.3-201ENST00000467363 1258 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 AC084198.1-201ENST00000477747 402 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC188H7C350 BOLA3P3-201ENST00000505182 232 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 AC108475.1-201ENST00000507880 950 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 AC021146.1-201ENST00000511202 716 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC188H7C350 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC188H7C350 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC188H7C350 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC188H7C350 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC188H7C350 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC188H7C350 OR4A45P-201ENST00000529954 901 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 OR4A12P-201ENST00000530847 918 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC188H7C350 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC188H7C350 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC188H7C350 SNORD39.3-201ENST00000584451 71 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 AL139286.1-201ENST00000604465 483 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 AL137849.1-201ENST00000604767 169 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 RNA5SP108-201ENST00000605921 117 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 AC019193.2-201ENST00000610012 634 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 AC022960.3-201ENST00000619794 441 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 AC123767.1-202ENST00000620407 817 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC188H7C350 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC188H7C350 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC188H7C350 MFSD8-245ENST00000641743 948 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC188H7C350 MTCO1P24-201ENST00000515438 1558 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC188H7C350 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC188H7C350 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CCDC188H7C350 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CCDC188H7C350 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC188H7C350 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC188H7C350 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
CCDC188H7C350 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCDC188H7C350 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC188H7C350 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC188H7C350 LARP1BP1-201ENST00000506036 1359 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC188H7C350 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC188H7C350 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC188H7C350 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC188H7C350 MIR383-201ENST00000362257 73 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CCDC188H7C350 MIR199A2-201ENST00000385289 110 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 RNU6-1300P-201ENST00000391046 108 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 AL603766.1-201ENST00000407763 664 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 Z98941.1-201ENST00000407764 100 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 AC108032.1-201ENST00000416706 207 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC188H7C350 BOLA3P4-201ENST00000418151 400 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 MTCYBP24-201ENST00000420387 1106 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 RPF2P1-201ENST00000424137 906 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 AC005517.2-201ENST00000424673 553 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC188H7C350 RPS27AP12-201ENST00000429552 465 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 COX6CP18-201ENST00000448769 222 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 NDUFA12P1-201ENST00000455914 406 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC188H7C350 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC188H7C350 RN7SL303P-201ENST00000469773 251 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 AC093267.1-201ENST00000489176 961 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 RPS27AP13-201ENST00000498403 237 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC188H7C350 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC188H7C350 ZNF705CP-201ENST00000530515 889 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC188H7C350 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC188H7C350 YPEL5P3-201ENST00000547227 352 ntBASIC4.03□□□□□ -1.76
CCDC188H7C350 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC188H7C350 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC188H7C350 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms