Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 AC079171.1-201ENST00000568788 914 ntBASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 AC006270.2-201ENST00000578523 652 ntBASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 AC126365.2-201ENST00000580630 379 ntBASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 AC022069.1-201ENST00000582910 658 ntBASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 AP004247.3-201ENST00000608682 624 ntBASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 VN1R74P-201ENST00000613259 503 ntBASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 AL354798.1-201ENST00000622505 329 ntBASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 AC126544.2-201ENST00000625174 749 ntBASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 PABPC1P7-201ENST00000413177 1513 ntBASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 AC090337.1-201ENST00000579651 2074 ntBASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
NPIPA2E9PIF3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 RNU6-444P-201ENST00000383988 108 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 MIR1250-201ENST00000408098 113 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AC073264.1-201ENST00000411508 416 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 RPS3AP9-201ENST00000417027 792 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AL389915.1-201ENST00000422463 466 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 ELOCP18-201ENST00000434209 337 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 RRM2P4-201ENST00000441721 562 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 RPS20P32-201ENST00000456044 356 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AC091153.1-201ENST00000466297 402 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AC078785.3-201ENST00000476607 425 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 TMED11P-201ENST00000479478 690 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AL139099.1-201ENST00000497398 403 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 HNRNPKP5-201ENST00000515300 253 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 IGKV2-38-201ENST00000517443 247 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 MTND5P21-201ENST00000531961 522 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AC114878.2-201ENST00000604863 1251 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AL391261.4-201ENST00000616012 481 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AL591424.2-201ENST00000617023 128 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AC007275.1-201ENST00000621243 671 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 AF127577.6-201ENST00000623352 2191 ntBASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.62□□□□□ -1.83
NPIPA2E9PIF3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 USP8P1-201ENST00000494673 3183 ntBASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 OR1L1-202ENST00000373686 1083 ntBASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 MIR513A2-201ENST00000385249 127 ntBASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 AC096533.1-201ENST00000411645 353 ntBASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 AL445584.1-201ENST00000431451 330 ntBASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 RNF2P1-201ENST00000442955 1010 ntBASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 AL592437.1-201ENST00000443781 492 ntBASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 HMGN3P1-201ENST00000453847 193 ntBASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 OR9M1P-201ENST00000459641 921 ntBASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 SNRPGP3-201ENST00000469405 227 ntBASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.61□□□□□ -1.83
NPIPA2E9PIF3 UBE2CP3-201ENST00000502715 450 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms