Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AL132657.2-201ENST00000564417 358 ntBASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 HSPE1P14-201ENST00000605812 302 ntBASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 AC091946.2-201ENST00000606105 291 ntBASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 AC109809.1-201ENST00000619665 545 ntBASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 FAM157B-203ENST00000639350 358 ntBASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 AL133412.1-201ENST00000380194 2992 ntBASIC3.66□□□□□ -1.82
TRBV4-1A0A0J9YWV2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.65□□□□□ -1.82
TRBV4-1A0A0J9YWV2 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.65□□□□□ -1.82
TRBV4-1A0A0J9YWV2 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
TRBV4-1A0A0J9YWV2 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TRBV4-1A0A0J9YWV2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TRBV4-1A0A0J9YWV2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRBV4-1A0A0J9YWV2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RNU6-83P-201ENST00000384568 112 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MIR649-201ENST00000384843 97 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RNU2-42P-201ENST00000410697 113 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL139128.1-201ENST00000413921 941 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MTCO3P1-205ENST00000422088 832 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL732292.1-201ENST00000426692 226 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RPS6P12-201ENST00000432491 726 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 HMGB1P37-201ENST00000439613 609 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL500522.2-201ENST00000448562 343 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC098826.2-201ENST00000452011 651 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC087385.1-201ENST00000475062 312 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ACTG1P13-201ENST00000486987 1043 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RN7SL604P-201ENST00000492589 296 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC005726.1-201ENST00000494679 427 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC034244.1-201ENST00000507687 207 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC108475.1-201ENST00000507880 950 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RNU6-1261P-201ENST00000517194 104 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 PSMB7P1-201ENST00000556349 514 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC138915.2-201ENST00000569776 97 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MIR4504-201ENST00000577413 92 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 SNORD39.3-201ENST00000584451 71 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL451074.6-201ENST00000608512 729 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC005332.6-201ENST00000613178 446 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC021755.4-201ENST00000616620 456 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL356121.2-201ENST00000624715 780 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC139713.2-214ENST00000642059 1811 ntBASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ELL2P4-201ENST00000446870 1376 ntBASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 SNORA60-201ENST00000362396 134 ntBASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 HMGN2P8-201ENST00000391458 268 ntBASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC119751.3-201ENST00000399720 670 ntBASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MTND4P13-201ENST00000402078 1023 ntBASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL133270.1-201ENST00000402635 279 ntBASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 HSPE1P12-201ENST00000412576 301 ntBASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RPS27AP7-201ENST00000422792 455 ntBASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC092447.3-201ENST00000426027 686 ntBASIC3.64□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC008065.1-201ENST00000428525 348 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms