Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 RPPH1-201ENST00000516869 333 ntBASIC19.62■□□□□ 0.73
UBP1Q9NZI7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 C1QL1P1-201ENST00000568105 661 ntBASIC19.62■□□□□ 0.73
UBP1Q9NZI7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 AC110285.5-201ENST00000611501 352 ntBASIC19.62■□□□□ 0.73
UBP1Q9NZI7 ITM2C-210ENST00000620962 501 ntBASIC19.62■□□□□ 0.73
UBP1Q9NZI7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 KRT16P5-201ENST00000455284 522 ntBASIC19.61■□□□□ 0.73
UBP1Q9NZI7 AC133681.1-201ENST00000465482 601 ntBASIC19.61■□□□□ 0.73
UBP1Q9NZI7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.61■□□□□ 0.73
UBP1Q9NZI7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 PRORSD1P-201ENST00000295112 541 ntBASIC19.6■□□□□ 0.73
UBP1Q9NZI7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBP1Q9NZI7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms